MirGeneDB ID | Csc-Mir-5305-P9b |
Family name |
MIR-5305 (all species) |
Seed |
UGGGCUU |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-5305-P9a
Csc-Mir-5305-P10
|
Orthologues |
Isc-Mir-5305
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Chelicerata
|
Genome context (GCF_000671375.1_CSC) |
NW_019384740.1: 267777-267836 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAGAUAGAAGACAACCCAUUUGGCGGACUCUAAGUUAAUCUCCAAGCCCAAUGGUCAUUUACGUCAAUUGGGCUUGAAGAUUAACUUAGACCCCGCCAAAUACGUCAUAUAACGACAGGA
Get precursor sequence
|
Structure | 10 20 30 40 50
GAGAUAGAAGACAACCC--| AC C GGUCAU
AUUUGGCGG UCUAAGUUAAUCU CAAGCCCAAU U
UAAACCGCC AGAUUCAAUUAGA GUUCGGGUUA U
AGGACAGCAAUAUACUGCA^ CC A ACUGCA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Csc-Mir-5305-P9b_5p* |
mirBase accession | None |
Sequence |
0- UAAGUUAAUCUCCAAGCCCAAUG -23
Get sequence
|
Mature sequence |
Csc-Mir-5305-P9b_3p |
mirBase accession | None |
Sequence |
37- UUGGGCUUGAAGAUUAACUUAGA -60
Get sequence
|