MirGeneDB ID | Csc-Mir-7-P14 |
Family name |
MIR-7 (all species) |
Seed |
GGAAGAC |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-7-P15
|
Orthologues |
Aae-Mir-7
Asu-Mir-7
Bfl-Mir-7
Bge-Mir-7
Bla-Mir-7
Cgi-Mir-7
Cin-Mir-7
Cte-Mir-7
Dan-Mir-7
Dma-Mir-7
Dme-Mir-7
Dmo-Mir-7
Dsi-Mir-7
Dya-Mir-7
Esc-Mir-7
Hme-Mir-7
Isc-Mir-7
Lan-Mir-7
Lgi-Mir-7
Lpo-Mir-7
Npo-Mir-7
Obi-Mir-7
Ovu-Mir-7
Pfl-Mir-7
Pmi-Mir-7
Sko-Mir-7
Spu-Mir-7
Tca-Mir-7
Xbo-Mir-7
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019384339.1: 676564-676623 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUGUUUCCUUAUUAAUUCUUGUUCCCUGUCUGGAAGACUAGUGAUUUUGUUGUUCUGAAUAUGAGAAACAAAGAAUCUCUAUCUUCCGAUAGUGUGCAAGAAAAUCAACAAAUACUUCAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUGUUUCCUUAUUAAUU---| UCC U C U G UCUGAA
CUUGU CUGUC GGAAGA UAG GAUUUU UUGU U
GAACG GAUAG CCUUCU AUC CUAAGA AACA A
AACUUCAUAAACAACUAAAA^ UGU - - U - AAGAGU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Csc-Mir-7-P14_5p |
mirBase accession | None |
Sequence |
0- UGGAAGACUAGUGAUUUUGUUGU -23
Get sequence
|
Star sequence |
Csc-Mir-7-P14_3p* |
mirBase accession | None |
Sequence |
38- CAAAGAAUCUCUAUCUUCCGAU -60
Get sequence
|