MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-96-P3w

Family name MIR-96 (all species)
Seed AUGGCAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-96-P1w  Csc-Mir-96-P1x  Csc-Mir-96-P2w  Csc-Mir-96-P3x 
Orthologues Aae-Mir-96-P3  Ami-Mir-96-P3-v1  Ami-Mir-96-P3-v2  Asu-Mir-96-P3  Bfl-Mir-96-P3  Bge-Mir-96-P3  Bla-Mir-96-P3  Bpl-Mir-96-P3  Bta-Mir-96-P3-v1  Bta-Mir-96-P3-v2  Cbr-Mir-96-P3  Cel-Mir-96-P3  Cfa-Mir-96-P3-v1  Cfa-Mir-96-P3-v2  Cgi-Mir-96-P3  Cin-Mir-96-P3  Cli-Mir-96-P3-v1  Cli-Mir-96-P3-v2  Cmi-Mir-96-P3-v1  Cmi-Mir-96-P3-v2  Cpi-Mir-96-P3-v1  Cpi-Mir-96-P3-v2  Cpo-Mir-96-P3-v1  Cpo-Mir-96-P3-v2  Dan-Mir-96-P3  Dma-Mir-96-P3  Dme-Mir-96-P3  Dmo-Mir-96-P3  Dno-Mir-96-P3-v1  Dno-Mir-96-P3-v2  Dpu-Mir-96-P3  Dsi-Mir-96-P3  Dya-Mir-96-P3  Ete-Mir-96-P3-v1  Ete-Mir-96-P3-v2  Gga-Mir-96-P3-v1  Gga-Mir-96-P3-v2  Gja-Mir-96-P3-v1  Gja-Mir-96-P3-v2  Hme-Mir-96-P3  Hsa-Mir-96-P3-v1  Hsa-Mir-96-P3-v2  Isc-Mir-96-P3  Lan-Mir-96-P3  Lch-Mir-96-P3  Lgi-Mir-96-P3  Loc-Mir-96-P3-v1  Loc-Mir-96-P3-v2  Mdo-Mir-96-P3-v1  Mdo-Mir-96-P3-v2  Mml-Mir-96-P3-v1  Mml-Mir-96-P3-v2  Mmu-Mir-96-P3-v1  Mmu-Mir-96-P3-v2  Mun-Mir-96-P3-v1  Mun-Mir-96-P3-v2  Oan-Mir-96-P3-v1  Oan-Mir-96-P3-v2  Ocu-Mir-96-P3-v1  Ocu-Mir-96-P3-v2  Pbv-Mir-96-P3-v1  Pbv-Mir-96-P3-v2  Pfl-Mir-96-P3  Pmi-Mir-96-P3  Rno-Mir-96-P3-v1  Rno-Mir-96-P3-v2  Sha-Mir-96-P3-v1  Sha-Mir-96-P3-v2  Sko-Mir-96-P3  Spt-Mir-96-P3  Spu-Mir-96-P3  Sto-Mir-96-P3-v1  Sto-Mir-96-P3-v2  Tca-Mir-96-P3  Tgu-Mir-96-P3  Xtr-Mir-96-P3-v1  Xtr-Mir-96-P3-v2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019385290.1: 223516-223575 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCGGUCCGCCGUCGUUCCCUUCCUCUUAAUGGCACUGGAAGAAUUCACGGCUCUGUUGUCAACCCGUGAUUUCUCUAGUGCUAUGAAGAGUAACAGGAAUGAUCUGCUCUCUCCCAC
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Structure
        10         20         30        40        50          
GGGCCGGUCCGCCGUCG-    CUUC-|    A           A   U      CUCUGU 
                  UUCC     CUCUU AUGGCACUGGA GAA UCACGG      \
                  AAGG     GAGAA UAUCGUGAUCU CUU AGUGCC      U
CACCCUCUCUCGUCUAGU    ACAAU^    G           -   U      CAACUG 
.       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-96-P3w_5p
mirBase accessionNone
Sequence 
0- AAUGGCACUGGAAGAAUUCACGG -23
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Star sequence

Csc-Mir-96-P3w_3p*
mirBase accessionNone
Sequence 
38- GUGAUUUCUCUAGUGCUAUGAA -60
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