MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-10-P1

Family name

MIR-10 (all species)

Seed

Species

Fruit fly (Drosophila mojavensis)

MiRBase ID

dmo-mir-10

Paralogues

Dmo-Mir-10-P2 Dmo-Mir-10-P3 Dmo-Mir-10-P4

Orthologues

Aae-Mir-10-P1-v1 Aae-Mir-10-P1-v2 Aca-Mir-10-P1b-v1 Aca-Mir-10-P1b-v2 Aca-Mir-10-P1c-v1 Aca-Mir-10-P1c-v2 Aca-Mir-10-P1d-v1 Aca-Mir-10-P1d-v2 Ami-Mir-10-P1b-v1 Ami-Mir-10-P1b-v2 Ami-Mir-10-P1c-v1 Ami-Mir-10-P1c-v2 Ami-Mir-10-P1d-v1 Ami-Mir-10-P1d-v2 Asu-Mir-10-P1 Bfl-Mir-10-P1-v1 Bfl-Mir-10-P1-v2 Bge-Mir-10-P1-v1 Bge-Mir-10-P1-v2 Bla-Mir-10-P1-v1 Bla-Mir-10-P1-v2 Bta-Mir-10-P1b-v1 Bta-Mir-10-P1b-v2 Bta-Mir-10-P1c-v1 Bta-Mir-10-P1c-v2 Cbr-Mir-10-P1 Cel-Mir-10-P1 Cfa-Mir-10-P1b-v1 Cfa-Mir-10-P1b-v2 Cfa-Mir-10-P1c-v1 Cfa-Mir-10-P1c-v2 Cgi-Mir-10-P1 Cli-Mir-10-P1b-v1 Cli-Mir-10-P1b-v2 Cli-Mir-10-P1c-v1 Cli-Mir-10-P1c-v2 Cli-Mir-10-P1d-v1 Cli-Mir-10-P1d-v2 Cmi-Mir-10-P1b-v1 Cmi-Mir-10-P1b-v2 Cmi-Mir-10-P1c-v1 Cmi-Mir-10-P1c-v2 Cmi-Mir-10-P1d-v1 Cmi-Mir-10-P1d-v2 Cpi-Mir-10-P1b-v1 Cpi-Mir-10-P1b-v2 Cpi-Mir-10-P1c-v1 Cpi-Mir-10-P1c-v2 Cpi-Mir-10-P1d-v1 Cpi-Mir-10-P1d-v2 Cpo-Mir-10-P1b-v1 Cpo-Mir-10-P1b-v2 Cpo-Mir-10-P1c-v1 Cpo-Mir-10-P1c-v2 Csc-Mir-10-P1q1 Csc-Mir-10-P1q2 Csc-Mir-10-P1q3 Csc-Mir-10-P1r Cte-Mir-10-P1 Dan-Mir-10-P1 Dma-Mir-10-P1-v1 Dma-Mir-10-P1-v2 Dme-Mir-10-P1 Dno-Mir-10-P1b-v1 Dno-Mir-10-P1b-v2 Dno-Mir-10-P1c-v1 Dno-Mir-10-P1c-v2 Dpu-Mir-10-P1-v1 Dpu-Mir-10-P1-v2 Dre-Mir-10-P1b1-v1 Dre-Mir-10-P1b1-v2 Dre-Mir-10-P1b2-v1 Dre-Mir-10-P1b2-v2 Dre-Mir-10-P1c1-v1 Dre-Mir-10-P1c1-v2 Dre-Mir-10-P1c2-v1 Dre-Mir-10-P1c2-v2 Dre-Mir-10-P1d1-v1 Dre-Mir-10-P1d1-v2 Dsi-Mir-10-P1 Dya-Mir-10-P1 Ebu-Mir-10-P1e Ebu-Mir-10-P1f Efe-Mir-10-P1i Efe-Mir-10-P1j Ete-Mir-10-P1b-v1 Ete-Mir-10-P1b-v2 Ete-Mir-10-P1c-v1 Ete-Mir-10-P1c-v2 Gga-Mir-10-P1b-v1 Gga-Mir-10-P1b-v2 Gga-Mir-10-P1c-v1 Gga-Mir-10-P1c-v2 Gga-Mir-10-P1d-v1 Gga-Mir-10-P1d-v2 Gja-Mir-10-P1b-v1 Gja-Mir-10-P1b-v2 Gja-Mir-10-P1c-v1 Gja-Mir-10-P1c-v2 Gja-Mir-10-P1d-v1 Gja-Mir-10-P1d-v2 Gmo-Mir-10-P1b1-v1 Gmo-Mir-10-P1b1-v2 Gmo-Mir-10-P1b2-v1 Gmo-Mir-10-P1b2-v2 Gmo-Mir-10-P1c1-v1 Gmo-Mir-10-P1c1-v2 Gmo-Mir-10-P1c2-v1 Gmo-Mir-10-P1c2-v2 Gmo-Mir-10-P1d1-v1 Gmo-Mir-10-P1d1-v2 Hme-Mir-10-P1-v1 Hme-Mir-10-P1-v2 Hsa-Mir-10-P1b-v1 Hsa-Mir-10-P1b-v2 Hsa-Mir-10-P1c-v1 Hsa-Mir-10-P1c-v2 Isc-Mir-10-P1-v1 Isc-Mir-10-P1-v2 Lan-Mir-10-P1g Lan-Mir-10-P1h Lch-Mir-10-P1b Lch-Mir-10-P1c Lch-Mir-10-P1d Lgi-Mir-10-P1 Loc-Mir-10-P1b-v1 Loc-Mir-10-P1b-v2 Loc-Mir-10-P1c-v1 Loc-Mir-10-P1c-v2 Loc-Mir-10-P1d-v1 Loc-Mir-10-P1d-v2 Lpo-Mir-10-P1k-v1 Lpo-Mir-10-P1k-v2 Lpo-Mir-10-P1l-v1 Lpo-Mir-10-P1l-v2 Lpo-Mir-10-P1m-v1 Lpo-Mir-10-P1m-v2 Lpo-Mir-10-P1n-v1 Lpo-Mir-10-P1n-v2 Lpo-Mir-10-P1o-v1 Lpo-Mir-10-P1o-v2 Lpo-Mir-10-P1p-v1 Lpo-Mir-10-P1p-v2 Mal-Mir-10-P1b1-v1 Mal-Mir-10-P1b1-v2 Mal-Mir-10-P1b2 Mal-Mir-10-P1c1-v1 Mal-Mir-10-P1c1-v2 Mal-Mir-10-P1c2a-v1 Mal-Mir-10-P1c2a-v2 Mal-Mir-10-P1c2b-v1 Mal-Mir-10-P1c2b-v2 Mal-Mir-10-P1d1-v1 Mal-Mir-10-P1d1-v2 Mdo-Mir-10-P1b-v1 Mdo-Mir-10-P1b-v2 Mdo-Mir-10-P1c-v1 Mdo-Mir-10-P1c-v2 Mml-Mir-10-P1b-v1 Mml-Mir-10-P1b-v2 Mml-Mir-10-P1c-v1 Mml-Mir-10-P1c-v2 Mmu-Mir-10-P1b-v1 Mmu-Mir-10-P1b-v2 Mmu-Mir-10-P1c-v1 Mmu-Mir-10-P1c-v2 Mun-Mir-10-P1b-v1 Mun-Mir-10-P1b-v2 Mun-Mir-10-P1c-v1 Mun-Mir-10-P1c-v2 Mun-Mir-10-P1d-v1 Mun-Mir-10-P1d-v2 Npo-Mir-10-P1 Nve-Mir-10 Oan-Mir-10-P1b-v1 Oan-Mir-10-P1b-v2 Oan-Mir-10-P1c-v1 Oan-Mir-10-P1c-v2 Ocu-Mir-10-P1b-v1 Ocu-Mir-10-P1b-v2 Ocu-Mir-10-P1c-v1 Ocu-Mir-10-P1c-v2 Pbv-Mir-10-P1b-v1 Pbv-Mir-10-P1b-v2 Pbv-Mir-10-P1c-v1 Pbv-Mir-10-P1c-v2 Pbv-Mir-10-P1d-v1 Pbv-Mir-10-P1d-v2 Pfl-Mir-10-P1 Pma-Mir-10-P1o1 Pma-Mir-10-P1o2 Pmi-Mir-10-P1 Rno-Mir-10-P1b-v1 Rno-Mir-10-P1b-v2 Rno-Mir-10-P1c-v1 Rno-Mir-10-P1c-v2 Sha-Mir-10-P1b-v1 Sha-Mir-10-P1b-v2 Sha-Mir-10-P1c-v1 Sha-Mir-10-P1c-v2 Sko-Mir-10-P1 Sme-Mir-10-P1s Sme-Mir-10-P1t Spt-Mir-10-P1b Spt-Mir-10-P1c Spu-Mir-10-P1 Sto-Mir-10-P1b-v1 Sto-Mir-10-P1b-v2 Sto-Mir-10-P1c-v1 Sto-Mir-10-P1c-v2 Tca-Mir-10-P1-v1 Tca-Mir-10-P1-v2 Tgu-Mir-10-P1b-v1 Tgu-Mir-10-P1b-v2 Tgu-Mir-10-P1c-v1 Tgu-Mir-10-P1c-v2 Tni-Mir-10-P1b1-v1 Tni-Mir-10-P1b1-v2 Tni-Mir-10-P1b2 Tni-Mir-10-P1c1-v1 Tni-Mir-10-P1c1-v2 Tni-Mir-10-P1c2-v1 Tni-Mir-10-P1c2-v2 Tni-Mir-10-P1d1-v1 Tni-Mir-10-P1d1-v2 Xla-Mir-10-P1b3-v1 Xla-Mir-10-P1b3-v2 Xla-Mir-10-P1b4-v1 Xla-Mir-10-P1b4-v2 Xla-Mir-10-P1c3-v1 Xla-Mir-10-P1c3-v2 Xla-Mir-10-P1c4-v1 Xla-Mir-10-P1c4-v2 Xla-Mir-10-P1d3-v1 Xla-Mir-10-P1d3-v2 Xla-Mir-10-P1d4-v1 Xla-Mir-10-P1d4-v2 Xtr-Mir-10-P1b-v1 Xtr-Mir-10-P1b-v2 Xtr-Mir-10-P1c-v1 Xtr-Mir-10-P1c-v2 Xtr-Mir-10-P1d-v1 Xtr-Mir-10-P1d-v2

Node of Origin (locus)

Bilateria

Node of Origin (family)

Eumetazoa

Genome context
(Dmoj_caf1)

scaffold_6540: 16502920-16502982 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

CAUGUCUAAGUUCCACUCUGUUCCACGUCUACCCUGUAGAUCCGAAUUUGUUGUACCAUAGCUUUAAGGACAAAUUCGGUUCUAGAGAGGUUUAUGUGGCUCAUUGUCCAGCGAAUCGAAUGU

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Structure

        10          20        30         40        50        60
CAUGUCUAAGUUCCACUC--  UU      CU   -| G    U           GUACCAU 
                    UG  CCACGU  ACC CU UAGA CCGAAUUUGUU       A
                    AC  GGUGUA  UGG GA AUCU GGCUUAAACAG       G
UGUAAGCUAAGCGACCUGUU  UC      UU   A^ G    U           GAAUUUC 
 120       110       100        90        80        70

Deep sequencing

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3' NTU

No

Motifs

CNNC at 3p(+17)

Tissue expression

-

+

Em	Fe	Ma	Ma

Mature sequence

Dmo-Mir-10-P1_5p

mirBase accession

Sequence

0- ACCCUGUAGAUCCGAAUUUGUU -22

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Co-mature sequence

Dmo-Mir-10-P1_3p

mirBase accession

None

Sequence

40- CAAAUUCGGUUCUAGAGAGGUUU -63

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