MirGeneDB ID | Dmo-Mir-14 |
Family name |
MIR-14 (all species) |
Seed |
CAGUCUU |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
dmo-mir-14
|
Paralogues |
|
Orthologues |
Aae-Mir-14
Bge-Mir-14
Dan-Mir-14
Dme-Mir-14
Dsi-Mir-14
Dya-Mir-14
Hme-Mir-14
Tca-Mir-14
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Dmoj_caf1) |
scaffold_6496: 2042860-2042918 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUAUAUCAACAACGUACUGCAACCUAUGUGGGAGCGAGACGGGGACUCACUGUGAUUUUUAUAUAGUCAGUCUUUUUCUCUCUCCUAUACAAAUUGCGGGCGUAUCAACAUGUUAAAU
Get precursor sequence
|
Structure | 10 20 30 40 50
UUUAUAUCAACAACGUA--| CCUA C CG C GUGAUU
CUGCAA UGUGGGAG GAGA GGGACU ACU \
GGCGUU AUAUCCUC CUCU UUCUGA UGA U
UAAAUUGUACAACUAUGCG^ AAAC U UU C UAUAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Dmo-Mir-14_5p* |
mirBase accession | None |
Sequence |
0- GGGAGCGAGACGGGGACUCACU -22
Get sequence
|
Mature sequence |
Dmo-Mir-14_3p |
mirBase accession | MIMAT0008632 |
Sequence |
37- UCAGUCUUUUUCUCUCUCCUAU -59
Get sequence
|