MirGeneDB ID | Dya-Mir-14 |
Family name |
MIR-14 (all species) |
Seed |
CAGUCUU |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
dya-mir-14
|
Paralogues |
|
Orthologues |
Aae-Mir-14
Bge-Mir-14
Dan-Mir-14
Dme-Mir-14
Dmo-Mir-14
Dsi-Mir-14
Hme-Mir-14
Tca-Mir-14
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 18072285-18072343 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAACAACGUAACGUACUGCAACCUAUGUGGGAGCGAGACGGGGACUCACUGUGCUUAUUAAAUAGUCAGUCUUUUUCUCUCUCCUAUACAAAUUGCGGGCGUAUCAUCAUGGCACGA
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAACAACGUAACGUA--| CCUA C CG C GUGCUU
CUGCAA UGUGGGAG GAGA GGGACU ACU \
GGCGUU AUAUCCUC CUCU UUCUGA UGA A
AGCACGGUACUACUAUGCG^ AAAC U UU C UAAAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Dya-Mir-14_5p* |
mirBase accession | None |
Sequence |
0- GGGAGCGAGACGGGGACUCACU -22
Get sequence
|
Mature sequence |
Dya-Mir-14_3p |
mirBase accession | MIMAT0009076 |
Sequence |
37- UCAGUCUUUUUCUCUCUCCUAU -59
Get sequence
|