MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-33

Family name MIR-33 (all species)
Seed UGCAUUG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-33
Paralogues
Orthologues Aae-Mir-33  Aca-Mir-33-P1  Aca-Mir-33-P3  Ami-Mir-33-P1  Ami-Mir-33-P3  Bfl-Mir-33-P6  Bfl-Mir-33-P7  Bge-Mir-33  Bla-Mir-33-P6  Bla-Mir-33-P7  Bta-Mir-33-P1  Bta-Mir-33-P3  Cfa-Mir-33-P1  Cfa-Mir-33-P3  Cgi-Mir-33  Cin-Mir-33  Cli-Mir-33-P1  Cli-Mir-33-P3  Cmi-Mir-33-P1  Cmi-Mir-33-P3  Cpi-Mir-33-P1  Cpi-Mir-33-P3  Cpo-Mir-33-P1  Cpo-Mir-33-P3  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dma-Mir-33  Dme-Mir-33  Dno-Mir-33-P1  Dno-Mir-33-P3  Dpu-Mir-33  Dre-Mir-33-P1a  Dsi-Mir-33  Dya-Mir-33  Ebu-Mir-33  Efe-Mir-33  Esc-Mir-33  Ete-Mir-33-P1  Ete-Mir-33-P3  Gga-Mir-33-P1  Gga-Mir-33-P3  Gja-Mir-33-P1  Gja-Mir-33-P3  Gmo-Mir-33-P1a  Gmo-Mir-33-P1b  Hme-Mir-33-P8  Hme-Mir-33-P9  Hsa-Mir-33-P1  Hsa-Mir-33-P3  Isc-Mir-33  Lan-Mir-33-P10  Lan-Mir-33-P11  Lch-Mir-33-P1  Lch-Mir-33-P3  Lgi-Mir-33  Loc-Mir-33-P1  Loc-Mir-33-P3  Lpo-Mir-33-P12  Lpo-Mir-33-P13  Lpo-Mir-33-P14  Mal-Mir-33-P1a  Mal-Mir-33-P1b  Mal-Mir-33-P3  Mdo-Mir-33-P3  Mml-Mir-33-P1  Mml-Mir-33-P3  Mmu-Mir-33-P3  Mun-Mir-33-P1  Mun-Mir-33-P3  Npo-Mir-33  Oan-Mir-33-P1  Oan-Mir-33-P3  Obi-Mir-33  Ocu-Mir-33-P1  Ocu-Mir-33-P3  Ovu-Mir-33  Pbv-Mir-33-P1  Pbv-Mir-33-P3  Pfl-Mir-33  Pma-Mir-33-o1  Pma-Mir-33-o2  Pma-Mir-33-o3  Pmi-Mir-33  Rno-Mir-33-P3  Sha-Mir-33-P3  Sko-Mir-33  Spt-Mir-33-P1  Spt-Mir-33-P3  Spu-Mir-33  Sto-Mir-33-P1  Sto-Mir-33-P3  Tca-Mir-33  Tgu-Mir-33-P1  Tgu-Mir-33-P3  Tni-Mir-33-P1a  Tni-Mir-33-P1b  Tni-Mir-33-P3  Xbo-Mir-33  Xla-Mir-33-P1c  Xla-Mir-33-P1d  Xla-Mir-33-P3a  Xla-Mir-33-P3b  Xtr-Mir-33-P1  Xtr-Mir-33-P3 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Dmoj_caf1)		 scaffold_6680: 17552852-17552915 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUCCGACAUCUUUGGAGCUGUGACGGAGGUGCAUUGUAGUCGCAUUGUCUGUAUCCUUUAUUCUCUGCGGCAAUACAACUGCAGUGCAAGCUCCGUGCAGUUCACUCGCAACGUCGGACACC
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Structure
        10           20        30         40        50        60 
CAUUCCGACAUCUUUGG---|     G      G-           CGC      UGUAUCCUU 
                    AGCUGU ACGGAG  UGCAUUGUAGU   AUUGUC         \
                    UUGACG UGCCUC  ACGUGACGUCA   UAACGG         U
CCACAGGCUGCAACGCUCAC^     -      GA           ACA      CGUCUCUUA 
  120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-33_5p
mirBase accessionMIMAT0008695
Sequence 
0- GUGCAUUGUAGUCGCAUUGUC -21
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Star sequence

Dmo-Mir-33_3p*
mirBase accessionNone
Sequence 
42- CAAUACAACUGCAGUGCAAGCU -64
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