MirGeneDB ID | Dno-Mir-483 |
Family name |
MIR-483 (all species) |
Seed |
ACUCCUC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-483
|
Paralogues |
|
Orthologues |
Bta-Mir-483-v1
Bta-Mir-483-v2
Cfa-Mir-483
Cpo-Mir-483
Ete-Mir-483
Hsa-Mir-483
Mml-Mir-483
Mmu-Mir-483
Ocu-Mir-483
Rno-Mir-483
Sha-Mir-483
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (dasNov3) |
JH581424: 30805-30864 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACCUGCAGCUCUGCACUGGGGGAGAGGGAGAGGACGGAAGGGAGAAGGGCGUGGUUUCCAGCAUCCCCCACUCCUCUCCUCCCGUCUUCUAUCUCUCCUUCCUGUCCUGCCUGGCUCGGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
ACCUGCAGCUCUGCACU--| GG AA A CGUGGUUUCC
GGGGGAGAG AGAGGACGG GGGAGA GGG A
CUUCCUCUC UCUUCUGCC UCCUCU CCU G
CGGCUCGGUCCGUCCUGUC^ UA C- - CACCCCCUAC
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dno-Mir-483_5p* |
mirBase accession | MIMAT0047908 |
Sequence |
0- AGGACGGAAGGGAGAAGGGCGU -22
Get sequence
|
Mature sequence |
Dno-Mir-483_3p |
mirBase accession | MIMAT0047909 |
Sequence |
38- CACUCCUCUCCUCCCGUCUUCU -60
Get sequence
|