MirGeneDB ID | Dno-Mir-760 |
Family name |
MIR-760 (all species) |
Seed |
GGCUCUG |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-760
|
Paralogues |
|
Orthologues |
Bta-Mir-760
Cpo-Mir-760
Ete-Mir-760
Hsa-Mir-760
Mml-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Rno-Mir-760
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH564055: 763993-764050 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGAGAAUGCUGCGUUACGGGGCGGGUCGCCCCCCUCAGUCCACCAGAGCCCGGAUACCUCACAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUACCGA
Get precursor sequence
|
Structure | 10 20 30 40 50
GGAGAAUGCUGCGUUAC- G-| GG C U UCCA C UACCU
GG GCG UCGC CCCC CAG CCAGAGCC GGA \
CC CGU AGCG GGGG GUC GGUCUCGG CUU C
AGCCAUUUUGCCCCAAAC AA^ AA A U UG-- - AAACA
110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dno-Mir-760_5p* |
mirBase accession | MIMAT0048012 |
Sequence |
0- CCCCUCAGUCCACCAGAGCCCGGA -24
Get sequence
|
Mature sequence |
Dno-Mir-760_3p |
mirBase accession | MIMAT0048013 |
Sequence |
37- CGGCUCUGGGUCUGUGGGGAG -58
Get sequence
|