MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-760

Family name MIR-760 (all species)
Seed GGCUCUG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-760  Cpo-Mir-760  Dno-Mir-760  Hsa-Mir-760  Mml-Mir-760  Mmu-Mir-760  Ocu-Mir-760  Rno-Mir-760 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
scaffold_287966: 11089-11146 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CAGGGACGCUGCGGCACGGGGCGCGUCGCCCCGCUCAGUCCGCCAGAGCGCGGAUGUCUCCGAAAUUCGGCUCUGGGUCUGUGGGGUGCGAAAUGCAACCCCCCUCCCGAGCCCCGCG
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Structure
        10         20          30        40        50          
CAGGGACGCUGCGGCAC-  G-   CG    -|  GCU   U  GC      G    UGUCU 
                  GG  GCG  UCGC CCC   CAG CC  CAGAGC CGGA     \
                  CC  CGU  AGCG GGG   GUC GG  GUCUCG GCUU     C
GCGCCCCGAGCCCUCCCC  AA   AA    U^  GU-   U  --      -    AAAGC 
      110       100        90         80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Star sequence

Ete-Mir-760_5p* (predicted)

mirBase accessionNone
Sequence
0- CCGCUCAGUCCGCCAGAGCGCGGA -24
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Mature sequence

Ete-Mir-760_3p

mirBase accessionNone
Sequence
37- CGGCUCUGGGUCUGUGGGGUG -58
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