MirGeneDB ID | Dya-Mir-9682 |
Family name |
MIR-9682 (all species) |
Seed |
UCACUGG |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
dya-mir-9682
|
Paralogues |
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Orthologues |
|
Node of Origin (locus) |
D. yakuba
|
Node of Origin (family) |
D. yakuba
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
X: 4178218-4178276 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUACAAGUGAUUAUUGAUAUCAAAAUGUCCCGGGGAAGUUACCUGGUGUAUUGUUUUUAAUCAACCAAUCACUGGAUAGCUUUCCUAGAACAAAAUGACAGUGCCUUUACAUAAACAGU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUACAAGUGAUUAUUGAUA--| AAA CCC C UG U UUUUU
UCA UGU GGGGAAGUUA C GUG AUUG A
AGU ACA UCCUUUCGAU G CAC UAAC A
UGACAAAUACAUUUCCGUGAC^ AAA AGA A GU - CAACU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dya-Mir-9682_5p* |
mirBase accession | MIMAT0039172 |
Sequence |
0- CGGGGAAGUUACCUGGUGUAUUG -23
Get sequence
|
Mature sequence |
Dya-Mir-9682_3p |
mirBase accession | MIMAT0039173 |
Sequence |
37- AUCACUGGAUAGCUUUCCUAGA -59
Get sequence
|