MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-975

Family name MIR-975 (all species)
Seed UAAACAC
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-975
Paralogues
Orthologues Dan-Mir-975  Dme-Mir-975  Dmo-Mir-975  Dsi-Mir-975 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
X: 11885984-11886046 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-975)
Mir-978 X: 11883774-11883834 [-] UCSC Ensembl
Mir-977 X: 11885660-11885723 [-] UCSC Ensembl
Mir-976 X: 11885829-11885886 [-] UCSC Ensembl
Mir-975 X: 11885984-11886046 [-] UCSC Ensembl
Mir-9690 X: 11886163-11886224 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAAUAUCCAGCAAUAUUGAAUUCUUGACUUUAAACACUGCCUACAUACUGUAUGUGUUUUGCACCCGAUACAGAUGUGGGGGUCGUUUGCAAUCAGAGAUUCCGCAGGCUACGAGGAUCGGG
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Structure
        10          20        30         40        50        60 
ACAAUAUCCAGCAAUAUU--    UC    CUU     -|  G       A     UGUGUUU 
                    GAAU  UUGA   UAAAC ACU CCUACAU CUGUA       U
                    CUUA  GACU   GUUUG UGG GGGUGUA GACAU       G
GGGCUAGGAGCAUCGGACGC    GA    AAC     C^  -       -     AGCCCAC 
 120       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-975_5p

mirBase accessionMIMAT0039177
Sequence
0- UUAAACACUGCCUACAUACUGUA -23
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Star sequence

Dya-Mir-975_3p* (predicted)

mirBase accessionMIMAT0039178
Sequence
41- CAGAUGUGGGGGUCGUUUGCAA -63
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