MirGeneDB ID | Ete-Mir-208-P1a |
---|---|
Family name | MIR-208 (all species) |
Seed | UAAGACG |
Species | Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID | |
Paralogues | Ete-Mir-208-P1b Ete-Mir-208-P2 |
Orthologues | Bta-Mir-208-P1 Cfa-Mir-208-P1 Cpo-Mir-208-P1 Dno-Mir-208-P1 Dre-Mir-208-P1 Ebu-Mir-208-o1 Gmo-Mir-208-P1 Hsa-Mir-208-P1 Lch-Mir-208-P1 Mal-Mir-208-P1 Mdo-Mir-208-P1 Mml-Mir-208-P1 Mmu-Mir-208-P1 Mun-Mir-208-P1 Ocu-Mir-208-P1 Rno-Mir-208-P1 Sha-Mir-208-P1 Sto-Mir-208-P1 |
Node of Origin (locus) | E. telfairi |
Node of Origin (family) | Vertebrata |
Genome context (echTel2) |
|
Precursor (pre-Mir +30nt flank) | AAGCUUUUUGCUCGCGUUAUGUUUCUCAUCCGAAUAUAAGACGAACAAAAGGUUUGUGet precursor sequence |
Structure | 10 20 --| C CG CUC AAGCUUUUUG UCG UUAUGUUU \ UUUGGAAAAC AGC AAUAUAAG A UG^ A AG CCU 50 40 30 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Ete-Mir-208-P1a_5p* |
mirBase accession | None |
Sequence |
0- AAGCUUUUUGCUCGCGUUAUGU -22
Get sequence
|
Mature sequence | Ete-Mir-208-P1a_3p |
mirBase accession | None |
Sequence |
35- AUAAGACGAACAAAAGGUUUGU -57
Get sequence
|