MirGeneDB ID | Ete-Mir-361-v1 |
Family name |
MIR-361 (all species) |
Seed |
UAUCAGA |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-361-v2
|
Orthologues |
Bta-Mir-361-v1
Cfa-Mir-361-v1
Cpo-Mir-361-v1
Dno-Mir-361-v1
Hsa-Mir-361-v1
Mml-Mir-361-v1
Mmu-Mir-361-v1
Ocu-Mir-361-v1
Rno-Mir-361-v1
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980378: 4175603-4175666 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AAUAGUGAUUCUUUCCUGGGAUUUGGGAGCUUAUCAGAAUCUCCAGGGGUACUUAUAAUUUGAAAAAAGUCCCCCAGGUGUGAUUCUGAUUUGCUUCCUUCUCCCCCUCCUCCUUUGAGAAUCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAUAGUGAUUCUUUCCU-- UUU UU U--| A U UUAUAAU
GGGA GGGAGC AUCAGAAUC CC GGGG AC U
CCCU CCUUCG UAGUCUUAG GG CCCC UG U
ACUAAGAGUUUCCUCCUCC CUU UU UGU^ A C AAAAAAG
120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-361-v1_5p |
mirBase accession | None |
Sequence |
0- UUAUCAGAAUCUCCAGGGGUAC -22
Get sequence
|
Star sequence |
Ete-Mir-361-v1_3p* |
mirBase accession | None |
Sequence |
40- CCCCCAGGUGUGAUUCUGAUUUGC -64
Get sequence
|