MirGeneDB ID | Ete-Mir-376-P1 |
Family name |
MIR-376 (all species) |
Seed |
UAGAUUC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-376-P3
Ete-Mir-376-P4
|
Orthologues |
Bta-Mir-376-P1
Cfa-Mir-376-P1
Cpo-Mir-376-P1
Dno-Mir-376-P1
Hsa-Mir-376-P1
Mml-Mir-376-P1
Mmu-Mir-376-P1
Ocu-Mir-376-P1
Rno-Mir-376-P1
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82299038-82299095 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AGGACGGAACCCUUCUUUGGUAUUUAAAAGGUAGAUUCUCCUUCUAUGAGUACAUUAUUUAUGAUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUAUCAAAUGCUGCUUGGAGACCUU
Get precursor sequence
|
Structure | 10 20 30 40 50
AGGACGGAACCCUUCUU--| U G A C U GUACAUUAU
UGGUAUU AAAA GU GAUU UCCU CUAUGA \
ACUAUGA UUUU CA CUAA AGGA GAUACU U
UUCCAGAGGUUCGUCGUAA^ C G C A - AAUUAGUAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-376-P1_5p |
mirBase accession | None |
Sequence |
0- GUAGAUUCUCCUUCUAUGAGUA -22
Get sequence
|
Star sequence |
Ete-Mir-376-P1_3p* |
mirBase accession | None |
Sequence |
37- AUCAUAGAGGAAAAUCCACGU -58
Get sequence
|