MirGeneDB ID | Ete-Mir-376-P3 |
Family name |
MIR-376 (all species) |
Seed |
UAGAUUU |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-376-P1
Ete-Mir-376-P4
|
Orthologues |
Bta-Mir-376-P3
Cfa-Mir-376-P3
Cpo-Mir-376-P3
Dno-Mir-376-P3
Hsa-Mir-376-P3
Mml-Mir-376-P3
Ocu-Mir-376-P3
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82299393-82299449 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
UGCCAGGCUGAAAUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUUUAUGGUUACGUUUUGAUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUACCAAAUUCUGCUUCUGAGACCU
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCCAGGCUGAAAUCUU--| U G A U CGUUU
UGGUAUU AAAA GU GAUUUUCCUUU AUGGUUA U
ACCAUGA UUUU CA CUAAAAGGAGA UACUAAU G
UCCAGAGUCUUCGUCUUAA^ C G C - UGGUA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-376-P3_5p |
mirBase accession | None |
Sequence |
0- GUAGAUUUUCCUUUUAUGGUUA -22
Get sequence
|
Star sequence |
Ete-Mir-376-P3_3p* |
mirBase accession | None |
Sequence |
36- AUCAUAGAGGAAAAUCCACGU -57
Get sequence
|