MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-376-P3

Family name MIR-376 (all species)
Seed UAGAUUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-376-P1  Ete-Mir-376-P4 
Orthologues Bta-Mir-376-P3  Cfa-Mir-376-P3  Cpo-Mir-376-P3  Dno-Mir-376-P3  Hsa-Mir-376-P3  Mml-Mir-376-P3  Ocu-Mir-376-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980297: 82299393-82299449 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UGCCAGGCUGAAAUCUUUGGUAUUUAAAAGGUAGAUUUUCCUUUUAUGGUUACGUUUUGAUGGUUAAUCAUAGAGGAAAAUCCACGUUUUCAGUACCAAAUUCUGCUUCUGAGACCU
Get precursor sequence
Structure
        10          20        30        40        50        
UGCCAGGCUGAAAUCUU--|      U    G  A           U       CGUUU 
                   UGGUAUU AAAA GU GAUUUUCCUUU AUGGUUA     U
                   ACCAUGA UUUU CA CUAAAAGGAGA UACUAAU     G
UCCAGAGUCUUCGUCUUAA^      C    G  C           -       UGGUA 
     110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-376-P3_5p

mirBase accessionNone
Sequence
0- GUAGAUUUUCCUUUUAUGGUUA -22
Get sequence
Star sequence

Ete-Mir-376-P3_3p*

mirBase accessionNone
Sequence
36- AUCAUAGAGGAAAAUCCACGU -57
Get sequence