MirGeneDB ID | Ete-Mir-448 |
Family name |
MIR-448 (all species) |
Seed |
UGCAUAU |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-448
Cfa-Mir-448
Cpo-Mir-448
Hsa-Mir-448
Mml-Mir-448
Mmu-Mir-448
Ocu-Mir-448
Rno-Mir-448
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980336: 12020066-12020146 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AGCAGUUGACCUUCACAUGGGUGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAACCCCUAUUUCAUAAUAAGAGGGGGCAGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCACCCACUUCGCCACGACAGAUC
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|
Structure | 10 20 30 40 50 60 70
AGCAGUUGACCUUCACAU| UGA G U AGGAAACCCCUAUUUCA
GGGUGGGGAGGU ACAUCCUGCAUA UGC GCC U
CCCACCCCUCUA UGUAGGAUGUAU ACG UGG A
CUAGACAGCACCGCUUCA^ CCC - U UCGGACGGGGGAGAAUA
. 130 120 110 100 90 80 |
Deep sequencing |
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|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Ete-Mir-448_5p* |
mirBase accession | None |
Sequence |
0- UGAACAUCCUGCAUAGUGCUGCC -23
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|
Mature sequence |
Ete-Mir-448_3p |
mirBase accession | None |
Sequence |
61- UUGCAUAUGUAGGAUGUCCC -81
Get sequence
|