MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-101-P2-v1

Family name MIR-101 (all species)
Seed ACAGUAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-101b
Paralogues Mmu-Mir-101-P1-v1  Mmu-Mir-101-P1-v2  Mmu-Mir-101-P2-v2 
Orthologues Aca-Mir-101-P2-v1  Aca-Mir-101-P2-v2  Ami-Mir-101-P2-v1  Ami-Mir-101-P2-v2  Bta-Mir-101-P2-v1  Bta-Mir-101-P2-v2  Cfa-Mir-101-P2-v1  Cfa-Mir-101-P2-v2  Cli-Mir-101-P2-v1  Cli-Mir-101-P2-v2  Cmi-Mir-101-P2-v1  Cmi-Mir-101-P2-v2  Cpi-Mir-101-P2-v1  Cpi-Mir-101-P2-v2  Cpo-Mir-101-P2-v1  Cpo-Mir-101-P2-v2  Dno-Mir-101-P2-v1  Dno-Mir-101-P2-v2  Dre-Mir-101-P2-v1  Dre-Mir-101-P2-v2  Ete-Mir-101-P2-v1  Ete-Mir-101-P2-v2  Gga-Mir-101-P2-v1  Gga-Mir-101-P2-v2  Gja-Mir-101-P2-v1  Gja-Mir-101-P2-v2  Gmo-Mir-101-P2-v1  Gmo-Mir-101-P2-v2  Hsa-Mir-101-P2-v1  Hsa-Mir-101-P2-v2  Lch-Mir-101-P2  Loc-Mir-101-P2-v1  Loc-Mir-101-P2-v2  Mal-Mir-101-P2-v1  Mal-Mir-101-P2-v2  Mdo-Mir-101-P2-v1  Mdo-Mir-101-P2-v2  Mml-Mir-101-P2-v1  Mml-Mir-101-P2-v2  Mun-Mir-101-P2-v1  Mun-Mir-101-P2-v2  Oan-Mir-101-P2-v1  Oan-Mir-101-P2-v2  Ocu-Mir-101-P2-v1  Ocu-Mir-101-P2-v2  Pbv-Mir-101-P2-v1  Pbv-Mir-101-P2-v2  Rno-Mir-101-P2-v1  Rno-Mir-101-P2-v2  Sha-Mir-101-P2-v1  Sha-Mir-101-P2-v2  Spt-Mir-101-P2  Sto-Mir-101-P2-v1  Sto-Mir-101-P2-v2  Tgu-Mir-101-P2-v1  Tgu-Mir-101-P2-v2  Tni-Mir-101-P2-v1  Tni-Mir-101-P2-v2  Xla-Mir-101-P2a-v1  Xla-Mir-101-P2a-v2  Xla-Mir-101-P2b-v1  Xla-Mir-101-P2b-v2  Xtr-Mir-101-P2-v1  Xtr-Mir-101-P2-v2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr19: 29135302-29135360 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-101-P2-v1)		 Mir-101-P2-v1 chr19: 29135302-29135360 [+] UCSC Ensembl
Mir-101-P2-v2 chr19: 29135303-29135359 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGUAGAUCUGAGACUGAACUGCCCUUUUUCGGUUAUCAUGGUACCGAUGCUGUAGCUCUGAAAGGUACAGUACUGUGAUAGCUGAAGAAUGGCGGUGCCAUCACGUUGAGGGGAGGC
Get precursor sequence
Structure
        10          20        30        40        50         
CAGGUAGAUCUGAGACUGA--|     C                    CGA    GUAGC 
                     ACUGCC UUUUUCGGUUAUCAUGGUAC   UGCU     U
                     UGGCGG AAGAAGUCGAUAGUGUCAUG   AUGG     C
CGGAGGGGAGUUGCACUACCG^     U                    AC-    AAAGU 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-101-P2-v1_5p*
mirBase accessionMIMAT0017046
Sequence 
0- UCGGUUAUCAUGGUACCGAUGCU -23
Get sequence
Proposed targets TargetScanVert: mmu-miR-101b-5p
miRDB: MIMAT0017046
Mature sequence

Mmu-Mir-101-P2-v1_3p
mirBase accessionMIMAT0000616
Sequence 
37- UACAGUACUGUGAUAGCUGAAG -59
Get sequence
Proposed targets microrna.org: MIMAT0000616
TargetScanVert: mmu-miR-101b-3p.1
miRDB: MIMAT0000616