MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-126-P2-v1

Family name MIR-126 (all species)
Seed CGUACCG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-126a
Paralogues Mmu-Mir-126-P2-v2  Mmu-Mir-126-P2-v3 
Orthologues Aca-Mir-126-P2-v1  Aca-Mir-126-P2-v2  Aca-Mir-126-P2-v3  Ami-Mir-126-P2-v1  Ami-Mir-126-P2-v2  Ami-Mir-126-P2-v3  Bta-Mir-126-P2-v1  Bta-Mir-126-P2-v2  Bta-Mir-126-P2-v3  Cfa-Mir-126-P2-v1  Cfa-Mir-126-P2-v2  Cfa-Mir-126-P2-v3  Cli-Mir-126-P2-v1  Cli-Mir-126-P2-v2  Cli-Mir-126-P2-v3  Cmi-Mir-126-P2-v1  Cmi-Mir-126-P2-v2  Cmi-Mir-126-P2-v3  Cpi-Mir-126-P2-v1  Cpi-Mir-126-P2-v2  Cpi-Mir-126-P2-v3  Cpo-Mir-126-P2-v1  Cpo-Mir-126-P2-v2  Cpo-Mir-126-P2-v3  Dno-Mir-126-P2-v1  Dno-Mir-126-P2-v2  Dno-Mir-126-P2-v3  Dre-Mir-126-P2a-v1  Dre-Mir-126-P2a-v2  Dre-Mir-126-P2a-v3  Dre-Mir-126-P2b-v1  Dre-Mir-126-P2b-v2  Dre-Mir-126-P2b-v3  Ete-Mir-126-P2-v1  Ete-Mir-126-P2-v2  Ete-Mir-126-P2-v3  Gga-Mir-126-P2-v1  Gga-Mir-126-P2-v2  Gga-Mir-126-P2-v3  Gja-Mir-126-P2-v1  Gja-Mir-126-P2-v2  Gja-Mir-126-P2-v3  Gmo-Mir-126-P2b-v1  Gmo-Mir-126-P2b-v2  Gmo-Mir-126-P2b-v3  Hsa-Mir-126-P2-v1  Hsa-Mir-126-P2-v2  Hsa-Mir-126-P2-v3  Lch-Mir-126-P2  Loc-Mir-126-P2-v1  Loc-Mir-126-P2-v2  Loc-Mir-126-P2-v3  Mal-Mir-126-P2b-v1  Mal-Mir-126-P2b-v2  Mal-Mir-126-P2b-v3  Mdo-Mir-126-P2-v1  Mdo-Mir-126-P2-v2  Mdo-Mir-126-P2-v3  Mml-Mir-126-P2-v1  Mml-Mir-126-P2-v2  Mml-Mir-126-P2-v3  Mun-Mir-126-P2-v1  Mun-Mir-126-P2-v2  Mun-Mir-126-P2-v3  Oan-Mir-126-P2-v1  Oan-Mir-126-P2-v2  Oan-Mir-126-P2-v3  Ocu-Mir-126-P2-v1  Ocu-Mir-126-P2-v2  Ocu-Mir-126-P2-v3  Pbv-Mir-126-P2-v1  Pbv-Mir-126-P2-v2  Pbv-Mir-126-P2-v3  Rno-Mir-126-P2-v1  Rno-Mir-126-P2-v2  Rno-Mir-126-P2-v3  Sha-Mir-126-P2-v1  Sha-Mir-126-P2-v2  Sha-Mir-126-P2-v3  Spt-Mir-126-P2  Sto-Mir-126-P2-v1  Sto-Mir-126-P2-v2  Sto-Mir-126-P2-v3  Tgu-Mir-126-P2-v1  Tgu-Mir-126-P2-v2  Tgu-Mir-126-P2-v3  Tni-Mir-126-P2b-v1  Tni-Mir-126-P2b-v2  Tni-Mir-126-P2b-v3  Xla-Mir-126-P2c  Xla-Mir-126-P2d  Xtr-Mir-126-P2-v1  Xtr-Mir-126-P2-v2  Xtr-Mir-126-P2-v3 
Node of Origin (locus) Vertebrata
Node of Origin (family) Olfactores
Genome context
(mm10)		 chr2: 26591365-26591423 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-126-P2-v1)		 Mir-126-P2-v1 chr2: 26591365-26591423 [+] UCSC Ensembl
Mir-126-P2-v2 chr2: 26591365-26591423 [+] UCSC Ensembl
Mir-126-P2-v3 chr2: 26591365-26591423 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGACGCCGCAUCUUUGCCGGUGACAGCACAUUAUUACUUUUGGUACGCGCUGUGACACUUCAAACUCGUACCGUGAGUAAUAAUGCGCGGUCAGCAGCCCAGCGCCAGGAAUGCAUC
Get precursor sequence
Structure
        10          20        30        40        50         
GGAGACGCCGCAUCUUU--| CGG    A  A           U       CGCUGUGAC 
                   GC   UGAC GC CAUUAUUACUU UGGUACG         \
                   CG   ACUG CG GUAAUAAUGAG GCCAUGC         A
CUACGUAAGGACCGCGACC^ ACG    G  C           U       UCAAACUUC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-126-P2-v1_5p*
mirBase accessionMIMAT0000137
Sequence 
0- CAUUAUUACUUUUGGUACGCGC -22
Get sequence
Proposed targets microrna.org: MIMAT0000137
TargetScanVert: mmu-miR-126a-5p
miRDB: MIMAT0000137
Mature sequence

Mmu-Mir-126-P2-v1_3p
mirBase accessionMIMAT0000138
Sequence 
37- UCGUACCGUGAGUAAUAAUGCG -59
Get sequence
Proposed targets microrna.org: MIMAT0000138
TargetScanVert: mmu-miR-126a-3p.1
miRDB: MIMAT0000138