MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-208-P2

Family name MIR-208 (all species)
Seed UAAGACG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-208a
Paralogues Mmu-Mir-208-P1 
Orthologues Aca-Mir-208-P2  Ami-Mir-208-P2  Bta-Mir-208-P2  Cfa-Mir-208-P2  Cpi-Mir-208-P2  Cpo-Mir-208-P2  Dno-Mir-208-P2  Ete-Mir-208-P2  Gja-Mir-208-P2  Hsa-Mir-208-P2  Lch-Mir-208-P2  Mdo-Mir-208-P2  Mml-Mir-208-P2  Oan-Mir-208-P2  Ocu-Mir-208-P2  Pbv-Mir-208-P2  Rno-Mir-208-P2  Sha-Mir-208-P2  Spt-Mir-208-P2  Xla-Mir-208-P2a  Xla-Mir-208-P2b  Xtr-Mir-208-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(mm10)		 chr14: 54949072-54949128 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-208-P2)		 Mir-208-P2 chr14: 54949072-54949128 [-] UCSC Ensembl
Mir-208-P1 chr14: 54975710-54975766 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGGCCCUUGCUUACUUCCUUUGACGGGUGAGCUUUUGGCCCGGGUUAUACCUGACACUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUCAUCAUGCAGCCUG
Get precursor sequence
Structure
        10          20        30        40        50        
GCUGGCCCUUGCUUACU--|        G  UG       G  C  GG      CUGAC 
                   UCCUUUGAC GG  AGCUUUU GC CG  UUAUAC     \
                   AGGAGACUG UU  UCGAAAA CG GC  AAUAUG     A
GUCCGACGUACUACUAUCG^        G  GU       A  A  AG      CACUC 
     110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-208-P2_5p*
mirBase accessionMIMAT0017014
Sequence 
0- GAGCUUUUGGCCCGGGUUAUAC -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-208a-5p
miRDB: MIMAT0017014
Mature sequence

Mmu-Mir-208-P2_3p
mirBase accessionMIMAT0000520
Sequence 
35- AUAAGACGAGCAAAAAGCUUGU -57
Get sequence
Proposed targets microrna.org: MIMAT0000520
TargetScanVert: mmu-miR-208a-3p
miRDB: MIMAT0000520