MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-28-P1

Family name MIR-28 (all species)
Seed AGGAGCU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-28a
Paralogues Mmu-Mir-28-P2  Mmu-Mir-28-P3 
Orthologues Bta-Mir-28-P1  Cfa-Mir-28-P1  Cpo-Mir-28-P1  Dno-Mir-28-P1  Ete-Mir-28-P1  Hsa-Mir-28-P1  Mml-Mir-28-P1  Ocu-Mir-28-P1  Rno-Mir-28-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr16: 24827868-24827929 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAGGAAGCAUAGAGGUGGUCCCUACCUUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGAUUCUCCCACUAGAUUGUGAGCUGCUGGAGGGCAGGCACUUGAAUUCAUCUGAAAAGGU
Get precursor sequence
Structure
        10          20        30        40        50        60
UGAGGAAGCAUAGAGGU--|  C   A     A  G             U  AGUUGCCUU 
                   GGU CCU CCUUC AG AGCUCACAGUCUA UG         U
                   UCA GGA GGGAG UC UCGAGUGUUAGAU AC         C
UGGAAAAGUCUACUUAAGU^  C   C     G  G             C  CCUCUUAGU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-28-P1_5p
mirBase accessionMIMAT0000653
Sequence 
0- AAGGAGCUCACAGUCUAUUGAG -22
Get sequence
Proposed targets microrna.org: MIMAT0000653
TargetScanVert: mmu-miR-28a-5p
miRDB: MIMAT0000653
Co-mature sequence

Mmu-Mir-28-P1_3p
mirBase accessionMIMAT0004661
Sequence 
40- CACUAGAUUGUGAGCUGCUGGA -62
Get sequence
Proposed targets microrna.org: MIMAT0004661
TargetScanVert: mmu-miR-28a-3p
miRDB: MIMAT0004661