MirGeneDB ID | Xla-Mir-7-P3b |
---|---|
Family name | MIR-7 (all species) |
Seed | GGAAGAC |
Species | African clawed frog (Xenopus laevis) |
MiRBase ID | |
Paralogues | Xla-Mir-7-P1c Xla-Mir-7-P1d Xla-Mir-7-P2e Xla-Mir-7-P2f Xla-Mir-7-P3a |
Orthologues | Aae-Mir-7 Ami-Mir-7-P3 Asu-Mir-7 Bfl-Mir-7 Bge-Mir-7 Bla-Mir-7 Cgi-Mir-7 Cin-Mir-7 Cli-Mir-7-P3 Cpi-Mir-7-P3 Cte-Mir-7 Dan-Mir-7 Dma-Mir-7 Dme-Mir-7 Dmo-Mir-7 Dre-Mir-7-P3 Dsi-Mir-7 Dya-Mir-7 Esc-Mir-7 Gmo-Mir-7-P3 Hme-Mir-7 Isc-Mir-7 Lan-Mir-7 Lch-Mir-7-P3 Lgi-Mir-7 Loc-Mir-7-P3 Lpo-Mir-7 Mal-Mir-7-P3 Mun-Mir-7-P3 Npo-Mir-7 Obi-Mir-7 Ovu-Mir-7 Pfl-Mir-7 Pma-Mir-7-o3 Pmi-Mir-7 Sko-Mir-7 Spt-Mir-7-P3 Spu-Mir-7 Tca-Mir-7 Tni-Mir-7-P3 Xbo-Mir-7 Xtr-Mir-7-P3 |
Node of Origin (locus) | X. laevis |
Node of Origin (family) | Bilateria |
Genome context (GCF_001663975.1_XLA_v2) |
NW_016742245.1: 346-411 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | UGGAAGACUAGUGAUUUUGUUGUUUUUAUAAAAGUUUGUCACAAACAACAAAUCGUAGUCUCCACUGet precursor sequence |
Structure | 10 20 30 --| A G U UU- A UGGA GACUA UGAUUU GUUGUUU AUAA A ACCU CUGAU GCUAAA CAACAAA UGUU G UC^ - - - CAC U 60 50 40 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Xla-Mir-7-P3b_5p |
mirBase accession | None |
Sequence |
0- UGGAAGACUAGUGAUUUUGUUGUU -24
Get sequence
|
Star sequence | Xla-Mir-7-P3b_3p* |
mirBase accession | None |
Sequence |
44- ACAACAAAUCGUAGUCUCCACU -66
Get sequence
|