MirGeneDB 3.0

15 microRNA genes with seed AAAGCUA
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Hmi-Mir-9 None MIR-9 AAAGCUA None None SCFE01000333.1 89277 89326 - Bilateria Bilateria Unknown 1
Mom-Mir-9 None MIR-9 CUUUGGU None None JARFOD010000029.1 763005 763066 + Bilateria Bilateria No 1
Gpa-Mir-9-P10 None MIR-9 CUUUGGU None None Scaffold27 1664994 1665054 - Pancrustacea Bilateria No 1 1
Aga-Mir-9-P12 aga-mir-79 MIR-9 AAAGCUA None MIMAT0001524 NC_064602.1 5875198 5875261 - Neoptera Bilateria No
Aae-Mir-9-P12 V aae-mir-79 MIR-9 AAAGCUA MIMAT0014294 MIMAT0014295 supercont1.785 213277 213338 + Neoptera Bilateria 2 No
Dan-Mir-9-P12 V dan-mir-79 MIR-9 AAAGCUA None MIMAT0008430 scaffold_12916 15864734 15864795 - Neoptera Bilateria 2 No
Dme-Mir-9-P12 V dme-mir-79 MIR-9 AAAGCUA MIMAT0020814 MIMAT0000352 2L 16698572 16698634 + Neoptera Bilateria 2 No
Dmo-Mir-9-P12 V dmo-mir-79 MIR-9 AAAGCUA None MIMAT0008690 scaffold_6500 7202147 7202208 + Neoptera Bilateria 2 No 1
Dsi-Mir-9-P12 V None MIR-9 AAAGCUA None None 2L 16226326 16226388 + Neoptera Bilateria 2 No
Dya-Mir-9-P12 V dya-mir-79 MIR-9 AAAGCUA None MIMAT0009124 2R 4404435 4404497 - Neoptera Bilateria 2 No
Gpa-Mir-9-P12 V None MIR-9 AAAGCUA None None Scaffold60 382326 382387 - Neoptera Bilateria 2 No 1 1
Pca-Mir-9-P31 None MIR-9 CUUUGGU None None KQ715418.1 82183 82242 + P. caudatus Bilateria No
Sro-Mir-9-P35a None MIR-9 AAAGCUA None None JANVAR010000473.1 1213595 1213662 + S. roscoffensis Bilateria No
Sro-Mir-9-P35b None MIR-9 AAAGCUA None None JANVAR010000473.1 1259271 1259338 + S. roscoffensis Bilateria No
Sro-Mir-9-P36 None MIR-9 AAAGCUA None None JANVAR010000606.1 626870 626929 + S. roscoffensis Bilateria No

(red - mature/co-mature, blue - star)

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