| MirGeneDB ID | Bge-Mir-306 |
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| Family name |
MIR-306 (all species) |
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| Seed |
CAGGUAC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-306
Dan-Mir-306
Dme-Mir-306
Dmo-Mir-306
Dsi-Mir-306
Dya-Mir-306
Hme-Mir-306
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Bger_2.0) |
KZ614731.1: 668749-668804 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUUCAGCAGUAGCAUGUGCUGUUUCCUCUGUCAGGUACUGAGUGACUCUGAGUAAUUUAAUUCUCAGAGGCACUUGGUUUCUGGCCGAGUGAACAGUAUGAACAGCGUAGUUAGCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUUCAGCAGUAGCAUGU--| UC U U UG A UAAU
GCUGUU CUC GUCAGG AC AGUG CUCUGAG U
UGACAA GAG CGGUCU UG UCAC GAGACUC U
ACGAUUGAUGCGACAAGUA^ GU C U GU G UUAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Drosha cut -1 on both arms. |
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Mir-306_5p |
| mirBase accession | None |
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| Sequence |
0- UCAGGUACUGAGUGACUCUGAG -22
Get sequence
|
|---|
| Star sequence |
Bge-Mir-306_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- CAGAGGCACUUGGUUUCUGGCC -56
Get sequence
|
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