MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-306

Family name MIR-306 (all species)
Seed CAGGUAC
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Aae-Mir-306  Bge-Mir-306  Dan-Mir-306  Dme-Mir-306  Dmo-Mir-306  Dsi-Mir-306  Hme-Mir-306 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2R: 4404575-4404633 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-306)
Mir-9-P13 2R: 4404254-4404316 [-] UCSC Ensembl
Mir-9-P12-v1 2R: 4404435-4404497 [-] UCSC Ensembl
Mir-9-P12-v2 2R: 4404435-4404497 [-] UCSC Ensembl
Mir-9-P11 2R: 4405087-4405156 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGAAAAGUUUUAAAGUCCACUCGGUGGCUCAGGUACUUAGUGACUCUCAAUGCUUUUGACAUUUUGGGGGUCACUCUGUGCCUGUGCUGCCAGUAGGACAUAAUCCACAAAUAAAGU
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Structure
        10          20         30        40        50         
AGUGAAAAGUUUUAAAG--   -|  C  UG  U       UU            UGCUUU 
                   UCC ACU GG  GC CAGGUAC  AGUGACUCUCAA      \
                   AGG UGA CC  CG GUCCGUG  UCACUGGGGGUU      U
UGAAAUAAACACCUAAUAC   A^  -  GU  U       UC            UUACAG 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-306_5p

mirBase accessionNone
Sequence
0- UCAGGUACUUAGUGACUCUCAA -22
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Star sequence

Dya-Mir-306_3p*

mirBase accessionNone
Sequence
37- GGGGGUCACUCUGUGCCUGUGC -59
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