MirGeneDB 2.1

MirGeneDB ID

Csc-Let-7-P18a

Family name LET-7 (all species)
Seed GAGGUAG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Let-7-P18b 
Orthologues Aae-Let-7  Bge-Let-7  Bpl-Let-7  Cgi-Let-7  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Hme-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Npo-Let-7  Obi-Let-7  Ovu-Let-7  Pfl-Let-7  Pmi-Let-7  Sko-Let-7  Spu-Let-7  Tca-Let-7  Xbo-Let-7 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019384344.1: 388884-388951 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUGUCCUCAAGAACAUGUGUGCCCGGUGUGAGGUAGUAGGUUGUAUAGUUGAGAACUACAUCCAUCAGGAGAACUGUACAACUUGCUAACUUUCCCUGGGACACACCCAAUCACCGAUAGAAGACU
Get precursor sequence
Structure
        10          20         30        40        50        60   
CUUUGUCCUCAAGAACAU--     -|    UGU   G                 GAGAACUACA 
                    GUGUG CCCGG   GAG UAGUAGGUUGUAUAGUU          \
                    CACAC GGGUC   UUC AUCGUUCAACAUGUCAA          U
UCAGAAGAUAGCCACUAACC     A^    CCU   A                 GAGGACUACC 
      120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Let-7-P18a_5p

mirBase accessionNone
Sequence
0- UGAGGUAGUAGGUUGUAUAGUU -22
Get sequence
Star sequence

Csc-Let-7-P18a_3p*

mirBase accessionNone
Sequence
45- CUGUACAACUUGCUAACUUUCCC -68
Get sequence