MirGeneDB ID | Csc-Let-7-P18a |
Family name |
LET-7 (all species) |
Seed |
GAGGUAG |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Let-7-P18b
|
Orthologues |
Aae-Let-7
Bge-Let-7
Bpl-Let-7
Cgi-Let-7
Cte-Let-7
Dan-Let-7
Dma-Let-7
Dme-Let-7
Dmo-Let-7
Dpu-Let-7
Dsi-Let-7
Dya-Let-7
Esc-Let-7
Hme-Let-7
Isc-Let-7
Lan-Let-7
Lgi-Let-7
Npo-Let-7
Obi-Let-7
Ovu-Let-7
Pfl-Let-7
Pmi-Let-7
Sko-Let-7
Spu-Let-7
Tca-Let-7
Xbo-Let-7
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019384344.1: 388884-388951 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUUGUCCUCAAGAACAUGUGUGCCCGGUGUGAGGUAGUAGGUUGUAUAGUUGAGAACUACAUCCAUCAGGAGAACUGUACAACUUGCUAACUUUCCCUGGGACACACCCAAUCACCGAUAGAAGACU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUUUGUCCUCAAGAACAU-- -| UGU G GAGAACUACA
GUGUG CCCGG GAG UAGUAGGUUGUAUAGUU \
CACAC GGGUC UUC AUCGUUCAACAUGUCAA U
UCAGAAGAUAGCCACUAACC A^ CCU A GAGGACUACC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Csc-Let-7-P18a_5p |
mirBase accession | None |
Sequence |
0- UGAGGUAGUAGGUUGUAUAGUU -22
Get sequence
|
Star sequence |
Csc-Let-7-P18a_3p* |
mirBase accession | None |
Sequence |
45- CUGUACAACUUGCUAACUUUCCC -68
Get sequence
|