MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-10-P1q1

Family name MIR-10 (all species)
Seed CCCUGUA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-10-P1q2  Csc-Mir-10-P1q3  Csc-Mir-10-P1r  Csc-Mir-10-P2r1  Csc-Mir-10-P2r2  Csc-Mir-10-P3r1  Csc-Mir-10-P3r2  Csc-Mir-10-P4q  Csc-Mir-10-P4r 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cgi-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lgi-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Sko-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Eumetazoa
Genome context
(GCF_000671375.1_CSC)		 NW_019384341.1: 354570-354628 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUAACUUCAAGGGUCGUGCUCUACAUCUACCCUGUAGAUCCGAAUUUGUCAGGGUAUCUGACAACAAAUUCGGUUCUAGAGAGGUUUGUGUGGUGCAUACGAUUCACCGAUGUUCUU
Get precursor sequence
Structure
        10          20        30         40        50        
AUAUAACUUCAAGGGUC--    U      CU   -| G    U          CAGGGU 
                   GUGC CUACAU  ACC CU UAGA CCGAAUUUGU      A
                   UACG GGUGUG  UGG GA AUCU GGCUUAAACA      U
UUCUUGUAGCCACUUAGCA    U      UU   A^ G    U          ACAGUC 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-10-P1q1_5p
mirBase accessionNone
Sequence 
0- ACCCUGUAGAUCCGAAUUUGUC -22
Get sequence
Star sequence

Csc-Mir-10-P1q1_3p*
mirBase accessionNone
Sequence 
36- CAAAUUCGGUUCUAGAGAGGUUU -59
Get sequence