MirGeneDB ID | Csc-Mir-34-P19b |
Family name |
MIR-34 (all species) |
Seed |
GGCAGUG |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-34-P19a
Csc-Mir-34-P19c
Csc-Mir-34-P20
|
Orthologues |
Aae-Mir-34
Asu-Mir-34
Bge-Mir-34
Cbr-Mir-34
Cel-Mir-34
Cgi-Mir-34
Cin-Mir-34
Cte-Mir-34
Dan-Mir-34
Dma-Mir-34
Dme-Mir-34
Dmo-Mir-34
Dpu-Mir-34
Dsi-Mir-34
Dya-Mir-34
Efe-Mir-34
Esc-Mir-34
Isc-Mir-34
Lgi-Mir-34
Npo-Mir-34
Obi-Mir-34
Ovu-Mir-34
Pfl-Mir-34
Pmi-Mir-34
Sko-Mir-34
Spu-Mir-34
Tca-Mir-34
Xbo-Mir-34
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019384483.1: 599502-599559 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAAUUUUUUUUACAUAAAAGUGAAUGGUGGUGGCAGUGUGGUUAGCUGGUUGUGAAUGAUGACGACAACCACUAGUCGUACUGCCGCCUUCCUUCGCUCUCUCAUCAUCCACCGUCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UAAUUUUUUUUACAUAAA--| U U- GU C GAAUG
AGUGAA GG GGUGGCAGUGUG UAG UGGUUGU \
UCGCUU CC CCGCCGUCAUGC AUC ACCAACA A
CUCUGCCACCUACUACUCUC^ - UU UG - GCAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Csc-Mir-34-P19b_5p |
mirBase accession | None |
Sequence |
0- UGGCAGUGUGGUUAGCUGGUUGU -23
Get sequence
|
Star sequence |
Csc-Mir-34-P19b_3p* |
mirBase accession | None |
Sequence |
36- AACCACUAGUCGUACUGCCGCC -58
Get sequence
|