MirGeneDB ID | Dmo-Mir-2-P8 |
Family name |
MIR-2 (all species) |
Seed |
GCAGUAU |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
dmo-mir-308
|
Paralogues |
Dmo-Mir-2-P1
Dmo-Mir-2-P2a
Dmo-Mir-2-P2b1
Dmo-Mir-2-P2b2
Dmo-Mir-2-P3b
Dmo-Mir-2-P4a-v1
Dmo-Mir-2-P4a-v2
Dmo-Mir-2-P4b-v1
Dmo-Mir-2-P4b-v2
Dmo-Mir-2-P5
Dmo-Mir-2-P6a
Dmo-Mir-2-P6b
Dmo-Mir-2-P6c
Dmo-Mir-2-P7
Dmo-Mir-2-P9
|
Orthologues |
Aae-Mir-2-P8
Asu-Mir-2-o8
Dan-Mir-2-P8
Dme-Mir-2-P8-v1
Dme-Mir-2-P8-v2
Dsi-Mir-2-P8
Dya-Mir-2-P8
Hme-Mir-2-P8
Tca-Mir-2-P8
|
Node of Origin (locus) |
Endopterygota
|
Node of Origin (family) |
Protostomia
|
Genome context (Dmoj_caf1) |
scaffold_6496: 11229074-11229133 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUUUGAAUUAUUUGAACACAUUCGAUGUCUCGCAGUAUAUUUUUGUGUUUUGUUUAUUAUAAAAAUCAAAUCACAGGAUUAUACUGUGAGUUAUCGGCUGAAACAACAACAAAUUGAAUU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUUUGAAUUAUUUGAACA--| UU U U U UUUAUU
CA CGAUG CUCGCAGUAUA UUUUGUG UUUG A
GU GCUAU GAGUGUCAUAU AGGACAC AAAC U
UUAAGUUAAACAACAACAAA^ CG U U U UAAAAA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dmo-Mir-2-P8_5p |
mirBase accession | None |
Sequence |
0- CGCAGUAUAUUUUUGUGUUUUG -22
Get sequence
|
Star sequence |
Dmo-Mir-2-P8_3p* |
mirBase accession | MIMAT0008689 |
Sequence |
38- AAUCACAGGAUUAUACUGUGAG -60
Get sequence
|