MirGeneDB ID | Dmo-Mir-92-P6 |
Family name |
MIR-92 (all species) |
Seed |
AUUGCAC |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
Dmo-Mir-92-P3
Dmo-Mir-92-P4
Dmo-Mir-92-P5
Dmo-Mir-92-P8
|
Orthologues |
Asu-Mir-92
Bfl-Mir-92-o6
Bla-Mir-92-o6
Cel-Mir-92
Dan-Mir-92-P6
Dme-Mir-92-P6
Dsi-Mir-92-P6
Dya-Mir-92-P6a
Dya-Mir-92-P6b
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Bilateria
|
Genome context (Dmoj_caf1) |
scaffold_6496: 9090464-9090534 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAAAAAUGUCAAAUUUUCAGCUGCGUUUGCAGGACGGUAUUUGUGACAAUAUGAAUUAUUGAAAUCAAUUUAUUCAGCAUAUUGCACAUCUCCCGGCCUAUAAAACAGUUGUGAGCCCGUCGAUUUAAAUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAAAAAUGUCAAAUUUU---| CG C A UAUU A AAUUAUUGAAA
CAGCUG UUUG AGG CGG UGUG CAAUAUG U
GUUGAC AAAU UCC GCC ACAC GUUAUAC C
GUAAAUUUAGCUGCCCGAGU^ A- A G CUCU - GACUUAUUUAA
. 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dmo-Mir-92-P6_5p* |
mirBase accession | None |
Sequence |
0- AGGACGGUAUUUGUGACAAUAUG -23
Get sequence
|
Mature sequence |
Dmo-Mir-92-P6_3p |
mirBase accession | None |
Sequence |
49- UAUUGCACAUCUCCCGGCCUAU -71
Get sequence
|