MirGeneDB ID | Dmo-Mir-963-v1 |
Family name |
MIR-963 (all species) |
Seed |
CAAGGUA |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
Dmo-Mir-963-v2
|
Orthologues |
Dan-Mir-963
Dme-Mir-963-v1
Dsi-Mir-963
Dya-Mir-963
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Dmoj_caf1) |
scaffold_6500: 14019392-14019454 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGAGUGCGCACUGAAUCGGUCUAAUCUAAAACAAGGUACAUAUCAGAGUGUUUCCCGUAUUCGAGUUUUGAAACCUCUGUAUAUACCUUUCAUUAGAUUCAACCGAAAGUCCAUAAAUAUUGA
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|
Structure | 10 20 30 40 50 60
GGAGUGCGCACUGAAUC--| CU AAC C U U CCGUAUU
GGU AAUCUAA AAGGUA AUA CAGAG GUUUC \
CCA UUAGAUU UUCCAU UAU GUCUC CAAAG C
AGUUAUAAAUACCUGAAAG^ AC ACU A - - UUUUGAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dmo-Mir-963-v1_5p |
mirBase accession | None |
Sequence |
0- ACAAGGUACAUAUCAGAGUGUUUC -24
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|
Star sequence |
Dmo-Mir-963-v1_3p* |
mirBase accession | None |
Sequence |
41- AACCUCUGUAUAUACCUUUCAU -63
Get sequence
|