MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-963

Family name MIR-963 (all species)
Seed CAUCUGU
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-963  Dme-Mir-963-v1  Dme-Mir-963-v2  Dmo-Mir-963-v1  Dmo-Mir-963-v2  Dsi-Mir-963 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2L: 13551212-13551277 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACUACUGCAUUGUUCUUGGUCUAAUCUAAAACAAGGUACAUAUCAGGUUGUUUCCUAUAUUGGAUGAUCGAAACAUCUGUAUAUACCUUUGUUCCGAAUGGACGAAAGAGCAUCUUCAAGUUAUA
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Structure
        10           20        30         40        50        60   
CACUACUGCAUUGUUCUUG---|    A  UAA     -    C   U     U    CCUAUAUU 
                      GUCUA UC   AACAA GGUA AUA CAGGU GUUU        \
                      CAGGU AG   UUGUU CCAU UAU GUCUA CAAA        G
AUAUUGAACUUCUACGAGAAAG^    A  CC-     U    A   -     -    GCUAGUAG 
    120       110       100         90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-963_5p*

mirBase accessionNone
Sequence
0- AACAAGGUACAUAUCAGGUUGUUU -24
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Mature sequence

Dya-Mir-963_3p

mirBase accessionNone
Sequence
43- ACAUCUGUAUAUACCUUUGUUCC -66
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