MirGeneDB ID | Dmo-Mir-973 |
Family name |
MIR-973 (all species) |
Seed |
CUGUUCA |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-973
Dme-Mir-973
Dsi-Mir-973
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Dmoj_caf1) |
scaffold_6328: 2909125-2909190 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUGCGUCAAAAUCACUCGGCUUUCACUUUUCGUGUUCGAUGUUUGAACUUGGAUUUUUAAAAUAUGAAAAGAAAUCUGUUCAUUCCUCGACACUAAGAGUUUAGGUCUAUAAACAACAUGGGUGUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GUGCGUCAAAAUCACUC--| UC C U UGUU UU UUUAAAAU
GGCUU ACUUUU GUGU CGA UGAAC GGAUU \
CUGGA UGAGAA CACA GCU ACUUG UCUAA A
UUGUGGGUACAACAAAUAU^ UU U - CCUU -- AGAAAAGU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dmo-Mir-973_5p* |
mirBase accession | None |
Sequence |
0- CGUGUUCGAUGUUUGAACUUGGAUU -25
Get sequence
|
Mature sequence |
Dmo-Mir-973_3p |
mirBase accession | None |
Sequence |
44- UCUGUUCAUUCCUCGACACUAA -66
Get sequence
|