MirGeneDB ID | Dmo-Mir-977 |
Family name |
MIR-977 (all species) |
Seed |
GAGAUAU |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-977
Dme-Mir-977
Dsi-Mir-977
Dya-Mir-977
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Dmoj_caf1) |
scaffold_6328: 2900861-2900925 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACCAGUUCGUUGUUCUGGCCCAGCCCGGUUCCGAUUGCGCGGACAUCUCAUCGUCUGACCAUUCGAUAACCGAUGAGAUAUUCACGUUAUCGAGACUGCGACAGCGGCACUGACUUCAAAUUUGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
ACCAGUUCGUUGUUCUG--- CCA-| CC UC U C C GUCUGACCA
GC GC GGU CGAU GCG GGA AUCUCAUC \
CG CG UCA GCUA UGC CUU UAGAGUAG U
UGUUUAAACUUCAGUCACGG ACAG^ -- GA U A A CCAAUAGCU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dmo-Mir-977_5p* |
mirBase accession | None |
Sequence |
0- CCGAUUGCGCGGACAUCUCAUC -22
Get sequence
|
Mature sequence |
Dmo-Mir-977_3p |
mirBase accession | None |
Sequence |
43- UGAGAUAUUCACGUUAUCGAGA -65
Get sequence
|