MirGeneDB ID | Dmo-Novel-10 |
Family name |
DMO-NOVEL-10 (all species) |
Seed |
UUCGAGG |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
D. mojavensis
|
Node of Origin (family) |
D. mojavensis
|
Genome context (Dmoj_caf1) |
scaffold_6308: 1307931-1307995 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUAGUAAAAAUCGAAGUUAAAACAUUUGCUUUCGAGGUAUUAUGUAGUGCUAUACGUUUAUGUUUCGGUUAUCACUACGUUUUAGCUCGUUAACGAAAUGCUCUACUGUGCAACAAGAAAAUGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAUAGUAAAAAUCGAAGUUAAAA- GCUUU-| G UU C UACGUUUA
CAUUU CGAG UA AUGUAGUG UA \
GUAAA GCUC AU UGCAUCAC AU U
UGUAAAAGAACAACGUGUCAUCUC GCAAUU^ G UU U UGGCUUUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dmo-Novel-10_5p |
mirBase accession | None |
Sequence |
0- UUUCGAGGUAUUAUGUAGUGCUA -23
Get sequence
|
Star sequence |
Dmo-Novel-10_3p* |
mirBase accession | None |
Sequence |
42- UCACUACGUUUUAGCUCGUUAAC -65
Get sequence
|