MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-10

Family name DMO-NOVEL-10 (all species)
Seed UUCGAGG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6308: 1307931-1307995 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUAGUAAAAAUCGAAGUUAAAACAUUUGCUUUCGAGGUAUUAUGUAGUGCUAUACGUUUAUGUUUCGGUUAUCACUACGUUUUAGCUCGUUAACGAAAUGCUCUACUGUGCAACAAGAAAAUGU
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Structure
        10        20         30         40        50        60  
CAUAGUAAAAAUCGAAGUUAAAA-     GCUUU-|   G  UU        C  UACGUUUA 
                        CAUUU      CGAG UA  AUGUAGUG UA        \
                        GUAAA      GCUC AU  UGCAUCAC AU        U
UGUAAAAGAACAACGUGUCAUCUC     GCAAUU^   G  UU        U  UGGCUUUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-10_5p

mirBase accessionNone
Sequence
0- UUUCGAGGUAUUAUGUAGUGCUA -23
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Star sequence

Dmo-Novel-10_3p*

mirBase accessionNone
Sequence
42- UCACUACGUUUUAGCUCGUUAAC -65
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