MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-5-P1a

Family name DMO-NOVEL-5 (all species)
Seed GCGAGCU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues Dmo-Novel-5-P1b  Dmo-Novel-5-P2  Dmo-Novel-5-P3  Dmo-Novel-5-P4  Dmo-Novel-5-P5 
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6308: 1308226-1308286 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGCAAAAAUCUAAGUUAAAUCAUUUGUUUGCGAGCUAUAACCUAGUGGAGUACGCUUAUAUUCCGUAUCACUAAGUUAUAGACCGCUGACAAAAUGCUUUACUUUGCAAAAGGAAAAUU
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Structure
        10         20         30        40        50          
AUUGCAAAAAUCUAAGU-    U  -|     U   AG       C      AGUACGCUU 
                  UAAA CA UUUGUU GCG  CUAUAAC UAGUGG         \
                  AUUU GU AAACAG CGC  GAUAUUG AUCACU         A
UUAAAAGGAAAACGUUUC    C  A^     U   CA       A      AUGCCUUAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-5-P1a_5p

mirBase accessionNone
Sequence
0- UGCGAGCUAUAACCUAGUGGAG -22
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Co-mature sequence

Dmo-Novel-5-P1a_3p

mirBase accessionNone
Sequence
39- UCACUAAGUUAUAGACCGCUGA -61
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