MirGeneDB ID | Dno-Mir-129-P2 |
Family name |
MIR-129 (all species) |
Seed |
UUUUUGC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-129-1
|
Paralogues |
Dno-Mir-129-P1
|
Orthologues |
Aca-Mir-129-P2
Ami-Mir-129-P2
Bta-Mir-129-P2
Cfa-Mir-129-P2
Cli-Mir-129-P2
Cmi-Mir-129-P2
Cpi-Mir-129-P2
Cpo-Mir-129-P2
Dre-Mir-129-P2a
Dre-Mir-129-P2b
Ete-Mir-129-P2
Gja-Mir-129-P2
Gmo-Mir-129-P2a
Gmo-Mir-129-P2b
Hsa-Mir-129-P2
Lch-Mir-129-P2
Loc-Mir-129-P2
Mal-Mir-129-P2a
Mal-Mir-129-P2b
Mdo-Mir-129-P2
Mml-Mir-129-P2
Mmu-Mir-129-P2
Mun-Mir-129-P2
Oan-Mir-129-P2
Ocu-Mir-129-P2
Pbv-Mir-129-P2
Pma-Mir-129-o2
Rno-Mir-129-P2
Sha-Mir-129-P2
Spt-Mir-129-P2
Sto-Mir-129-P2
Tgu-Mir-129-P2
Tni-Mir-129-P2a
Tni-Mir-129-P2b
Xla-Mir-129-P2c
Xla-Mir-129-P2d
Xtr-Mir-129-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Chordata
|
Genome context (dasNov3) |
JH569570: 1703745-1703809 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGCCGCAGCUGGGCUCCGUCUCCUUCAGCUCUUUUUGCGGUCUGGGCUUGCUGUUCUCUCAACAGUAGUCAGGAAGCCCUUACCCCAAAAAGUAUCUGCGGGAGACCUUAUCCACAAGGAAGACC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCCGCAGCUGGGCUCC-- U CU-| C CU G UGUUCUCUC
GUCUCCU CAG CUUUUUG GGU GGGCUU C A
CAGAGGG GUC GAAAAAC CCA CCCGAA G A
CCAGAAGGAACACCUAUUC C UAU^ C UU G ACUGAUGAC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dno-Mir-129-P2_5p |
mirBase accession | MIMAT0047624 |
Sequence |
0- CUUUUUGCGGUCUGGGCUUGC -21
Get sequence
|
Star sequence |
Dno-Mir-129-P2_3p* |
mirBase accession | MIMAT0047625 |
Sequence |
43- AAGCCCUUACCCCAAAAAGUAU -65
Get sequence
|