MirGeneDB ID | Dno-Mir-376-P4 |
Family name |
MIR-376 (all species) |
Seed |
ACAUAGA |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
|
Paralogues |
Dno-Mir-376-P1
Dno-Mir-376-P2
Dno-Mir-376-P3
|
Orthologues |
Bta-Mir-376-P4
Cfa-Mir-376-P4
Cpo-Mir-376-P4
Ete-Mir-376-P4
Hsa-Mir-376-P4
Mml-Mir-376-P4
Mmu-Mir-376-P4
Ocu-Mir-376-P4
Rno-Mir-376-P4
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
554781830_name_G734P6275FE9_T0_mate_554785391: 45-102 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGGACUAAAUCCUUCUUUGGUAUUUAAAAUGUGGAUAUUCCUUCUAUGUUUAUGUUAUUGAUGGUUAAACAUAGAGGAAAUUCCACGUUUUCAGUAUCAAAUGCUGCUGAAUCCACCA
Get precursor sequence
|
Structure | 10 20 30 40 50
AGGACUAAAUCCUUCUU--| U UA U UGUUAU
UGGUAUU AAAAUGUGGA UUCCU CUAUGUUUA \
ACUAUGA UUUUGCACCU AAGGA GAUACAAAU U
ACCACCUAAGUCGUCGUAA^ C UA - UGGUAG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | Not in assembly but in trace archive. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Star sequence |
Dno-Mir-376-P4_5p* |
mirBase accession | None |
Sequence |
0- GUGGAUAUUCCUUCUAUGUUUA -22
Get sequence
|
Mature sequence |
Dno-Mir-376-P4_3p |
mirBase accession | None |
Sequence |
37- AACAUAGAGGAAAUUCCACGU -58
Get sequence
|