MirGeneDB ID | Dno-Mir-451 |
Family name |
MIR-451 (all species) |
Seed |
AACCGUU |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-451
Ami-Mir-451
Bta-Mir-451
Cfa-Mir-451
Cli-Mir-451
Cmi-Mir-451
Cpi-Mir-451
Cpo-Mir-451
Dre-Mir-451
Ebu-Mir-451
Ete-Mir-451
Gga-Mir-451
Gja-Mir-451
Gmo-Mir-451
Hsa-Mir-451
Lch-Mir-451
Loc-Mir-451
Mal-Mir-451
Mdo-Mir-451
Mml-Mir-451
Mmu-Mir-451
Mun-Mir-451
Oan-Mir-451
Ocu-Mir-451
Pma-Mir-451
Rno-Mir-451
Sha-Mir-451
Spt-Mir-451
Sto-Mir-451
Tgu-Mir-451
Tni-Mir-451
Xla-Mir-451-P1
Xla-Mir-451-P2
Xtr-Mir-451
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (dasNov3) |
JH563368: 9790-9831 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGACCGCCAGGGCACUUGGGAAUGGCGAGGAAACCGUUACCAUUACUGAGUUUAGUAAUGGUAACGGUUCUCUUGCUGUACCCAGAAAACGUGCCAAGAAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
AGACCGCCAGGGCACUU--| A GA A
GGG AUGGCGAG AACCGUUACCAUUACUG G
CCC UGUCGUUC UUGGCAAUGGUAAUGAU U
AGAAGAACCGUGCAAAAGA^ A UC U
100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | As a non-canonical (Group 4, Kim et al. 2016) miRNA there is no discrete 3p read and the 3' end of the mature miRNA is somewhat arbitrary. |
3' NTU |
NA
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-451_5p |
mirBase accession | None |
Sequence |
0- AAACCGUUACCAUUACUGAGUU -22
Get sequence
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