MirGeneDB 2.1
MirGeneDB ID

Dno-Mir-8-P1a

Family name MIR-8 (all species)
Seed AAUACUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-200b
Paralogues Dno-Mir-8-P2a  Dno-Mir-8-P2b  Dno-Mir-8-P3a 
Orthologues Aae-Mir-8  Aca-Mir-8-P1a  Ami-Mir-8-P1a  Asu-Mir-8  Bfl-Mir-8-P1-v1  Bfl-Mir-8-P1-v2  Bge-Mir-8  Bla-Mir-8-P1  Bpl-Mir-8  Bta-Mir-8-P1a  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P1a  Cgi-Mir-8  Cin-Mir-8-P1  Cli-Mir-8-P1a  Cmi-Mir-8-P1a  Cpi-Mir-8-P1a  Cpo-Mir-8-P1a  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dre-Mir-8-P1a  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P1a  Gga-Mir-8-P1a  Gja-Mir-8-P1a  Gmo-Mir-8-P1a  Hme-Mir-8  Hsa-Mir-8-P1a  Isc-Mir-8  Lan-Mir-8  Lch-Mir-8-P1a  Lgi-Mir-8  Loc-Mir-8-P1a  Mal-Mir-8-P1a  Mdo-Mir-8-P1a  Mml-Mir-8-P1a  Mmu-Mir-8-P1a  Mun-Mir-8-P1a  Npo-Mir-8  Oan-Mir-8-P1a  Obi-Mir-8  Ocu-Mir-8-P1a  Ovu-Mir-8  Pbv-Mir-8-P1a  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P1a  Sha-Mir-8-P1a  Sko-Mir-8  Spt-Mir-8-P1a  Spu-Mir-8  Sto-Mir-8-P1a  Tca-Mir-8  Tgu-Mir-8-P1a  Tni-Mir-8-P1a  Xla-Mir-8-P1a1  Xla-Mir-8-P1a2  Xtr-Mir-8-P1a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(dasNov3)		 JH582619: 456846-456904 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-8-P1a)		 Mir-8-P3a JH582619: 454909-454967 [-] UCSC Ensembl
Mir-8-P1a JH582619: 456846-456904 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCCAGACCCAACUUGGGGCGGCCAUCGCCAUCUUACUGGGCAGCAUUGGAUGGUGUCUGGUCUCUAAUACUGCCUGGUAACGAUGACGGCGGCACUCUGUGCGCAGCGGGGGGCCGC
Get precursor sequence
Structure
        10           20        30         40        50        
CCCCCAGACCCAACUUG---|  CG   AU  C    -    UG     C      UGGUG 
                    GGG  GCC  CG CAUC UUAC  GGCAG AUUGGA     U
                    CUC  CGG  GC GUAG AAUG  CCGUC UAAUCU     C
CGCCGGGGGGCGACGCGUGU^  A-   CG  A    C    GU     A      CUGGU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Dno-Mir-8-P1a_5p*
mirBase accessionMIMAT0047740
Sequence 
0- CAUCUUACUGGGCAGCAUUGGA -22
Get sequence
Mature sequence

Dno-Mir-8-P1a_3p
mirBase accessionMIMAT0047741
Sequence 
36- UAAUACUGCCUGGUAACGAUGAC -59
Get sequence