MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-8-P2b

Family name MIR-8 (all species)
Seed AACACUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-141
Paralogues Dno-Mir-8-P1a  Dno-Mir-8-P2a  Dno-Mir-8-P3a 
Orthologues Aae-Mir-8  Asu-Mir-8  Bfl-Mir-8-P2  Bge-Mir-8  Bla-Mir-8-P2  Bpl-Mir-8  Bta-Mir-8-P2b  Cbr-Mir-8  Cel-Mir-8  Cfa-Mir-8-P2b  Cgi-Mir-8  Cin-Mir-8-P2  Cpo-Mir-8-P2b  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dre-Mir-8-P2b  Dsi-Mir-8  Dya-Mir-8  Esc-Mir-8  Ete-Mir-8-P2b  Hme-Mir-8  Hsa-Mir-8-P2b  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Mdo-Mir-8-P2b  Mml-Mir-8-P2b  Mmu-Mir-8-P2b  Npo-Mir-8  Oan-Mir-8-P2b  Obi-Mir-8  Ocu-Mir-8-P2b  Ovu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Rno-Mir-8-P2b  Sha-Mir-8-P2b  Sko-Mir-8  Spu-Mir-8  Tca-Mir-8 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(dasNov3)
JH562563: 113742-113806 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGAAUUCCUCGUUGGCCGGCUCUGGGUCCAUCUUCCAGUACAGUGUUGGAUGGUCUAAUAGCGAAGCUCCUAACACUGUCUGGUAAAGAUGGCUCCCGGGCCGGCUCCCUCGGCAAUGACCUU
Get precursor sequence
Structure
        10          20         30          40        50        60 
CCGGAAUUCCUCGUUGG--     U     U-       --|   U          AUGGUCUAA 
                   CCGGC CUGGG  CCAUCUU  CCAG ACAGUGUUGG         U
                   GGCCG GGCCC  GGUAGAA  GGUC UGUCACAAUC         A
UUCCAGUAACGGCUCCCUC     -     UC       AU^   -          CUCGAAGCG 
   120       110        100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-8-P2b_5p*

mirBase accessionMIMAT0047655
Sequence
0- CAUCUUCCAGUACAGUGUUGGA -22
Get sequence
Mature sequence

Dno-Mir-8-P2b_3p

mirBase accessionMIMAT0047656
Sequence
42- UAACACUGUCUGGUAAAGAUGGC -65
Get sequence