MirGeneDB ID | Dno-Mir-8-P2b |
Family name |
MIR-8 (all species) |
Seed |
AACACUG |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-141
|
Paralogues |
Dno-Mir-8-P1a
Dno-Mir-8-P2a
Dno-Mir-8-P3a
|
Orthologues |
Aae-Mir-8
Asu-Mir-8
Bfl-Mir-8-P2
Bge-Mir-8
Bla-Mir-8-P2
Bpl-Mir-8
Bta-Mir-8-P2b
Cbr-Mir-8
Cel-Mir-8
Cfa-Mir-8-P2b
Cgi-Mir-8
Cin-Mir-8-P2
Cpo-Mir-8-P2b
Csc-Mir-8
Cte-Mir-8
Dan-Mir-8
Dma-Mir-8
Dme-Mir-8
Dmo-Mir-8
Dpu-Mir-8
Dre-Mir-8-P2b
Dsi-Mir-8
Dya-Mir-8
Esc-Mir-8
Ete-Mir-8-P2b
Hme-Mir-8
Hsa-Mir-8-P2b
Isc-Mir-8
Lan-Mir-8
Lgi-Mir-8
Mdo-Mir-8-P2b
Mml-Mir-8-P2b
Mmu-Mir-8-P2b
Npo-Mir-8
Oan-Mir-8-P2b
Obi-Mir-8
Ocu-Mir-8-P2b
Ovu-Mir-8
Pfl-Mir-8
Pmi-Mir-8
Rno-Mir-8-P2b
Sha-Mir-8-P2b
Sko-Mir-8
Spu-Mir-8
Tca-Mir-8
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Bilateria
|
Genome context (dasNov3) |
JH562563: 113742-113806 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCGGAAUUCCUCGUUGGCCGGCUCUGGGUCCAUCUUCCAGUACAGUGUUGGAUGGUCUAAUAGCGAAGCUCCUAACACUGUCUGGUAAAGAUGGCUCCCGGGCCGGCUCCCUCGGCAAUGACCUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCGGAAUUCCUCGUUGG-- U U- --| U AUGGUCUAA
CCGGC CUGGG CCAUCUU CCAG ACAGUGUUGG U
GGCCG GGCCC GGUAGAA GGUC UGUCACAAUC A
UUCCAGUAACGGCUCCCUC - UC AU^ - CUCGAAGCG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dno-Mir-8-P2b_5p* |
mirBase accession | MIMAT0047655 |
Sequence |
0- CAUCUUCCAGUACAGUGUUGGA -22
Get sequence
|
Mature sequence |
Dno-Mir-8-P2b_3p |
mirBase accession | MIMAT0047656 |
Sequence |
42- UAACACUGUCUGGUAAAGAUGGC -65
Get sequence
|