Mir-281-P2-v1

MirGeneDB ID

Dya-Mir-281-P2-v1

Family name

MIR-281 (all species)

Seed

AGAGAGC

Species

Fruit fly (Drosophila yakuba)

MiRBase ID

Paralogues

Dya-Mir-281-P1-v1 Dya-Mir-281-P1-v2 Dya-Mir-281-P2-v2

Orthologues

Aae-Mir-281 Asu-Mir-281 Bfl-Mir-281 Bge-Mir-281 Bla-Mir-281 Bpl-Mir-281 Cgi-Mir-281 Cin-Mir-281 Csc-Mir-281 Cte-Mir-281 Dan-Mir-281-P2-v1 Dan-Mir-281-P2-v2 Dma-Mir-281 Dme-Mir-281-P2-v1 Dme-Mir-281-P2-v2 Dmo-Mir-281-P2-v1 Dmo-Mir-281-P2-v2 Dpu-Mir-281 Dsi-Mir-281-P2-v1 Dsi-Mir-281-P2-v2 Ebu-Mir-281 Esc-Mir-281 Hme-Mir-281 Isc-Mir-281 Npo-Mir-281 Obi-Mir-281 Ovu-Mir-281 Pfl-Mir-281 Sko-Mir-281 Sme-Mir-281 Sto-Mir-281 Tca-Mir-281

Node of Origin (locus)

Drosophila

Node of Origin (family)

Bilateria

Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)

2R: 8893568-8893634 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-281-P2-v1)

Mir-281-P1-v1 2R: 8893361-8893427 [+] UCSC Ensembl
Mir-281-P1-v2 2R: 8893362-8893426 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCUUUCAGAUCCCCCACGAAUAGUGAAAUGAAGAGAGCUAUCCGUCGACAGUCAAGUUAAUACCAAUUGUAAUACUGUCAUGGAAUUGCUCUCUUUGUAUAAUAUUCGAAAGGCGACGAUUAGAUUA

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Structure

        10           20        30        40         50        60   
GCUUUCAGAUCCCCCAC---|    GUGAA UG        UA-     C      CAAGUUAAUA 
                    GAAUA     A  AAGAGAGC   UCCGU GACAGU          \
                    CUUAU     U  UUCUCUCG   AGGUA CUGUCA          C
AUUAGAUUAGCAGCGGAAAG^    AAUA- GU        UUA     -      UAAUGUUAAC 
     120       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

He	Wh

Mature sequence

Dya-Mir-281-P2-v1_5p

mirBase accession

None

Sequence

0- AAGAGAGCUAUCCGUCGACAGU -22

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Co-mature sequence

Dya-Mir-281-P2-v1_3p

mirBase accession

None

Sequence

45- UGUCAUGGAAUUGCUCUCUUUG -67

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