MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-92-P5

Family name MIR-92 (all species)
Seed AUUGCAC
Species Fruit fly (Drosophila yakuba)
MiRBase ID dya-mir-310
Paralogues Dya-Mir-92-P3  Dya-Mir-92-P4  Dya-Mir-92-P6a  Dya-Mir-92-P6b  Dya-Mir-92-P7 
Orthologues Asu-Mir-92  Bfl-Mir-92-o5  Bla-Mir-92-o5  Cel-Mir-92  Dan-Mir-92-P5  Dme-Mir-92-P5  Dmo-Mir-92-P5  Dsi-Mir-92-P5  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Drosophila
Node of Origin (family) Bilateria
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2R: 12724949-12725008 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P5)
Mir-7 2R: 12702754-12702815 [-] UCSC Ensembl
Mir-992 2R: 12723689-12723744 [+] UCSC Ensembl
Mir-991 2R: 12723801-12723862 [+] UCSC Ensembl
Mir-9681 2R: 12724136-12724190 [+] UCSC Ensembl
Mir-92-P6a 2R: 12724560-12724622 [+] UCSC Ensembl
Mir-92-P7 2R: 12724704-12724764 [+] UCSC Ensembl
Mir-92-P6b 2R: 12724839-12724897 [+] UCSC Ensembl
Mir-92-P5 2R: 12724949-12725008 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAGUGCUUGCAAAUACACAAACAUUUGCAGGACGGGUCGUGUGGCAGUGUAUUGAUUUCUUAGCUAUAUUGCACACUUCCCGCCCUUUAAAUGUCCAGUGUUUCGACUUGGAUAUCUG
Get precursor sequence
Structure
        10         20         30        40        50          
AAAAGUGCUUGCAAAUA-   AA-|      C   A    UC     G       UUGAUU 
                  CAC   ACAUUUG AGG CGGG  GUGUG CAGUGUA      \
                  GUG   UGUAAAU UCC GCCC  CACAC GUUAUAU      U
GUCUAUAGGUUCAGCUUU   ACC^      U   C    UU     -       CGAUUC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-92-P5_5p*

mirBase accessionMIMAT0037350
Sequence
0- AGGACGGGUCGUGUGGCAGUGUA -23
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Mature sequence

Dya-Mir-92-P5_3p

mirBase accessionMIMAT0009092
Sequence
38- UAUUGCACACUUCCCGCCCUUU -60
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