MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-431

Family name MIR-431 (all species)
Seed GUCUUGC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cpo-Mir-431  Hsa-Mir-431  Mml-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980297: 82400847-82400910 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCACUGCUCUCUCUUGGUCGUCCUGCGGGCUGUCUUGCAGGCCGUCAUGCAGGCCACCUUGACGGUAACGUUGCAGGUCGCCCUGCCGGGCUUCUCGCAAGACGACAUCCUCGUCGUUCACAAU
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Structure
        10          20        30        40        50        60 
GCACUGCUCUCUCUUGG--|    C      CU    U     C  UCA    GGCCACCUU 
                   UCGUC UGCGGG  GUCU GCAGG CG   UGCA         G
                   AGCAG ACGCUC  CGGG CGUCC GC   ACGU         A
UAACACUUGCUGCUCCUAC^    A      UU    C     C  UGG    UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut +3 on the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-431_5p

mirBase accessionNone
Sequence
0- UGUCUUGCAGGCCGUCAUGCA -21
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Co-mature sequence

Ete-Mir-431_3p

mirBase accessionNone
Sequence
43- CAGGUCGCCCUGCCGGGCUUC -64
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