MirGeneDB ID | Ete-Mir-432 |
Family name |
MIR-432 (all species) |
Seed |
CUUGGAG |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-432
Cfa-Mir-432
Cpo-Mir-432
Dno-Mir-432
Hsa-Mir-432
Mml-Mir-432
Ocu-Mir-432
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980297: 82397342-82397410 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
UGGCUCAAGCCAUUGCGUGACUCCUCCAUGUCUUGGAGUAGGUCAUUGGGUGGAUCCUCUAUUUCCUGAUGUGGGCCACUGGAUGGCUCCUCCAUGUCUUGGAGUAGAUCAAUGGGCAGCUCUUCCAUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGGCUCAAGCCAUUGCG- -| C UGUCU UA G AUCCUCUAUU
UGA CU CUCCA UGGAG GGUCAUU GGUGG U
ACU GA GAGGU ACCUC UCGGUAG UCACC C
UUACCUUCUCGACGGGUA A^ U UCUGU C- G GGGUGUAGUC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-432_5p |
mirBase accession | None |
Sequence |
0- UCUUGGAGUAGGUCAUUGGGUGGA -24
Get sequence
|
Star sequence |
Ete-Mir-432_3p* (predicted) |
mirBase accession | None |
Sequence |
47- ACUGGAUGGCUCCUCCAUGUCU -69
Get sequence
|