MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-217-v1

Family name MIR-217 (all species)
Seed ACUGCAU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-217
Paralogues Mmu-Mir-217-v2 
Orthologues Aca-Mir-217-v1  Ami-Mir-217-v1  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v1  Cfa-Mir-217-v1  Cli-Mir-217-v1  Cmi-Mir-217  Cpi-Mir-217-v1  Cpo-Mir-217-v1  Dno-Mir-217-v1  Dre-Mir-217-v1  Ete-Mir-217-v1  Gga-Mir-217-v1  Gja-Mir-217-v1  Gmo-Mir-217  Hsa-Mir-217-v1  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v1  Mun-Mir-217-v1  Oan-Mir-217-v1  Ocu-Mir-217-v1  Pbv-Mir-217-v1  Rno-Mir-217-v1  Sha-Mir-217-v1  Spt-Mir-217  Sto-Mir-217-v1  Tgu-Mir-217-v1  Tni-Mir-217  Xtr-Mir-217-v1 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(mm10)		 chr11: 28763761-28763819 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-v1)		 Mir-216-P2a chr11: 28746204-28746265 [+] UCSC Ensembl
Mir-216-P2b chr11: 28757018-28757079 [+] UCSC Ensembl
Mir-217-v2 chr11: 28763760-28763820 [+] UCSC Ensembl
Mir-217-v1 chr11: 28763761-28763819 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUAGUCAUUACAGUUUUUGAUGUUGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUUAAUCCCCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAACCACCAGCAAACAC
Get precursor sequence
Structure
        10          20        30        40        50         
CAUAGUCAUUACAGUUUUU--|      C  A  C     C         C   AUAAGA 
                     GAUGUUG AG UA UGCAU AGGAACUGA UGG      C
                     CUACGAC UC GU ACGUA UCCUUGACU ACC      U
CACAAACGACCACCAACAAAU^      U  C  U     A         -   CCUAAU 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-217-v1_5p
mirBase accessionMIMAT0000679
Sequence 
0- UACUGCAUCAGGAACUGACUGGA -23
Get sequence
Proposed targets microrna.org: MIMAT0000679
TargetScanVert: mmu-miR-217-5p
miRDB: MIMAT0000679
Star sequence

Mmu-Mir-217-v1_3p*
mirBase accessionMIMAT0017072
Sequence 
37- CAUCAGUUCCUAAUGCAUUGCC -59
Get sequence
Proposed targets TargetScanVert: mmu-miR-217-3p
miRDB: MIMAT0017072