MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-224

Family name MIR-224 (all species)
Seed AAGUCAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-224
Paralogues
Orthologues Bta-Mir-224  Cfa-Mir-224  Cpo-Mir-224  Ete-Mir-224  Hsa-Mir-224  Mml-Mir-224  Ocu-Mir-224  Rno-Mir-224 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)
chrX: 72261036-72261105 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-224)
Mir-224 chrX: 72261036-72261105 [-] UCSC Ensembl
Mir-452-v1 chrX: 72262235-72262295 [-] UCSC Ensembl
Mir-452-v2 chrX: 72262236-72262292 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGCAGAAGAGACAAGGCCCGGGGGCUUUUAAGUCACUAGUGGUUCCGUUUAGUAGAUGGUUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCAGCAUCAUCGGUGAAGCA
Get precursor sequence
Structure
        10          20        30        40        50        60     
CUGGCAGAAGAGACAAG--| CCG        UA         U   U      AGUAGAUGGUUU 
                   GC   GGGGCUUU  AGUCACUAG GGU CCGUUU            \
                   CG   CCCCGAAA  UCAGUGAUC CCG GGUAAA            G
ACGAAGUGGCUACUACGAC^ AGA        CA         -   U      ACUUUGUUACGU 
.       120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-224_5p

mirBase accessionMIMAT0000671
Sequence
0- UAAGUCACUAGUGGUUCCGUUUAG -24
Get sequence
Proposed targets microrna.org: MIMAT0000671
TargetScanVert: mmu-miR-224-5p
miRDB: MIMAT0000671
Star sequence

Mmu-Mir-224_3p*

mirBase accessionMIMAT0017062
Sequence
47- AAAUGGUGCCCUAGUGACUACAA -70
Get sequence
Proposed targets TargetScanVert: mmu-miR-224-3p
miRDB: MIMAT0017062