| MirGeneDB ID | Dgr-Mir-216-P1 |
|---|---|
| Family name | MIR-216 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-216-P2c |
| Orthologues | Aae-Mir-216-P1 Aga-Mir-216-P1 Agr-Mir-216-P1 Asu-Mir-216-P1 Bge-Mir-216-P1 Cte-Mir-216-P1 Dan-Mir-216-P1 Dlo-Mir-216-P1 Dma-Mir-216-P1 Dme-Mir-216-P1 Dmo-Mir-216-P1 Dpu-Mir-216-P1 Dsi-Mir-216-P1 Dya-Mir-216-P1 Eba-Mir-216-P1 Efe-Mir-216-P1a Efe-Mir-216-P1b Esc-Mir-216-P1 Gpa-Mir-216-P1 Hme-Mir-216-P1 Hru-Mir-216-P1 Lan-Mir-216-P1e Lan-Mir-216-P1f Lgi-Mir-216-P1 Lhy-Mir-216-P1 Mgi-Mir-216-P1 Mom-Mir-216-P1 Ofu-Mir-216-P1 Pau-Mir-216-P1 Pca-Mir-216-P1 Pcr-Mir-216-P1 Pdu-Mir-216-P1 Pve-Mir-216-P1 Rph-Mir-216-P1 Sma-Mir-216-P1 Snu-Mir-216-P1 Tca-Mir-216-P1 War-Mir-216-P1 |
| Node of Origin (locus) | Nephrozoa |
| Node of Origin (family) | Nephrozoa |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000014.1: 1076465-1076535 [-] |
| Clustered miRNAs (< 50kb from Mir-216-P1) |
Mir-12
CAJFCJ010000014.1: 1074976-1075034 [-]
Mir-216-P2c CAJFCJ010000014.1: 1075923-1075987 [-] Mir-216-P1 CAJFCJ010000014.1: 1076465-1076535 [-] |
| Seed | AAUAUCA |
| Precursor (pre-Mir +30nt flank) |
CCUUACCAAAAAAUCUUCCUCAUCUGCGCCUAAUAUCAGCCGGUAAUUCUGAGACGUAAGUGGCAAGUAAGGCAAAACUCAGAAUUUCGACUGAUAUCUGGCUCUGGUGUAGUGUUUCUGCUUGCUUAAUAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCUUACCAAAAAAUCUUC- -| UGC UA C U ACGUAAGUGGC CU CAUC GCC AUAUCAG CGG AAUUCUGAG A GA GUGG CGG UAUAGUC GCU UUAAGACUC A AUAAUUCGUUCGUCUUUGU U^ UCU UC A - AAAACGGAAUG . 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Dgr-Mir-216-P1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUAUCAGCCGGUAAUUCUGAG -23
Get sequence
|
| Star sequence | Dgr-Mir-216-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
49- CAGAAUUUCGACUGAUAUCUGG -71
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|
