MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-216-P1

Family name MIR-216 (all species)
Seed AAUAUCA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-283
Paralogues Dmo-Mir-216-P2 
Orthologues Aae-Mir-216-P1  Asu-Mir-216-P1  Bge-Mir-216-P1  Cgi-Mir-216-P1  Cte-Mir-216-P1  Dan-Mir-216-P1  Dma-Mir-216-P1  Dme-Mir-216-P1  Dpu-Mir-216-P1  Dsi-Mir-216-P1  Dya-Mir-216-P1  Efe-Mir-216-P1a  Efe-Mir-216-P1b  Esc-Mir-216-P1  Hme-Mir-216-P1  Lan-Mir-216-P1e  Lan-Mir-216-P1f  Lgi-Mir-216-P1  Tca-Mir-216-P1 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Dmoj_caf1)		 scaffold_6359: 3257730-3257797 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P1)		 Mir-216-P1 scaffold_6359: 3257730-3257797 [+] Ensembl
Mir-216-P2 scaffold_6359: 3259172-3259240 [+] Ensembl
Mir-12 scaffold_6359: 3259793-3259856 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUGUCACCUCACCCGAUUCUCAAAGGUAAAUAUCAGCUGGUAAUUCUGGGAGCAAUGCCCAAUAUGAAACACUCGGAAUUUCAGUUGGUAUAUACUUUUUUGAAUUGCAUUUUAUCACCAAAGCG
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Structure
        10          20        30        40        50        60    
CAGCUGUCACCUCACCC--|    UC       A           U         AGCAAUGCCC 
                   GAUUC  AAAGGUA AUAUCAGCUGG AAUUCUGGG          \
                   UUAAG  UUUUCAU UAUGGUUGACU UUAAGGCUC          A
GCGAAACCACUAUUUUACG^    UU       A           -         ACAAAGUAUA 
      120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-216-P1_5p
mirBase accessionMIMAT0008640
Sequence 
0- AAAUAUCAGCUGGUAAUUCUGGG -23
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Star sequence

Dmo-Mir-216-P1_3p*
mirBase accessionNone
Sequence 
46- CGGAAUUUCAGUUGGUAUAUAC -68
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