MirGeneDB 2.1

MirGeneDB ID

Dno-Let-7-P2b3

Family name LET-7 (all species)
Seed GAGGUAG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-98
Paralogues Dno-Let-7-P1c  Dno-Let-7-P1d  Dno-Let-7-P2a1  Dno-Let-7-P2a2  Dno-Let-7-P2a3  Dno-Let-7-P2b1  Dno-Let-7-P2b2  Dno-Let-7-P2c1  Dno-Let-7-P2c2  Dno-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2b3  Ami-Let-7-P2b3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b3  Cfa-Let-7-P2b3  Cgi-Let-7  Cpi-Let-7-P2b3  Cpo-Let-7-P2b3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dre-Let-7-P2b3a  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b3  Gja-Let-7-P2b3  Gmo-Let-7-P2b3a  Gmo-Let-7-P2b3b  Hme-Let-7  Hsa-Let-7-P2b3  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Loc-Let-7-P2b3  Mal-Let-7-P2b3a  Mml-Let-7-P2b3  Mmu-Let-7-P2b3  Mun-Let-7-P2b3  Npo-Let-7  Oan-Let-7-P2b3  Obi-Let-7  Ocu-Let-7-P2b3  Ovu-Let-7  Pbv-Let-7-P2b3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b3  Sko-Let-7  Spt-Let-7-P2b3  Spu-Let-7  Sto-Let-7-P2b3  Tca-Let-7  Tni-Let-7-P2b3a  Tni-Let-7-P2b3b  Xbo-Let-7  Xla-Let-7-P2b3c  Xla-Let-7-P2b3d  Xtr-Let-7-P2b3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(dasNov3)
JH580953: 951667-951745 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P2b3)
Let-7-P2a3 JH580953: 950712-950782 [+] UCSC Ensembl
Let-7-P2b3 JH580953: 951667-951745 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUGCUAUAGGAUUCUGUUCAUGCCAGGGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAUUUUAGGCCCCAAUUAGAAGAUAACUAUGCAACUUACUACUUUCCCUGGUGUGUGGCAUAUUCACACAUAGUCUG
Get precursor sequence
Structure
        10         20         30        40        50        60         
CCUUGCUAUAGGAUUCU-   -|         U                 U   GUGGGGUAGGGAUUUU 
                  GUU CAUGCCAGGG GAGGUAGUAAGUUGUAU GUU                A
                  CGG GUGUGGUCCC UUUCAUCAUUCAACGUA CAA                G
GUCUGAUACACACUUAUA   U^         -                 U   UAGAAGAUUAACCCCG 
       130       120       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
To
Mature sequence

Dno-Let-7-P2b3_5p

mirBase accessionMIMAT0047592
Sequence
0- UGAGGUAGUAAGUUGUAUUGUU -22
Get sequence
Star sequence

Dno-Let-7-P2b3_3p*

mirBase accessionMIMAT0047593
Sequence
58- CUAUGCAACUUACUACUUUCC -79
Get sequence